Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05560 and BPUM_3290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence dna-align/BSNT_05560___mbl.1.24716.seq
# -bsequence dna-align/BPUM_3290___mbl.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05560___mbl-BPUM_3290___mbl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05560___mbl-BPUM_3290___mbl.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05560___mbl
# 2: BPUM_3290___mbl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1003
# Identity: 828/1003 (82.6%)
# Similarity: 828/1003 (82.6%)
# Gaps: 2/1003 ( 0.2%)
# Score: 3428.0
#
#
#=======================================
BSNT_05560___ 1 ATGTTTGCAAGGGATATTGGTATTGACCTCGGTACTGCAAATGTACTGAT 50
||||||||.|||||||||||.|||||.||.||||||||.|||||||||||
BPUM_3290___m 1 ATGTTTGCTAGGGATATTGGAATTGATCTTGGTACTGCCAATGTACTGAT 50
BSNT_05560___ 51 CCATGTTAAAGGTAAAGGAATTGTTCTGAATGAACCTTCCGTTGTTGCAC 100
.|||||.|||||.|||||||||||..|.||||||||.||.||.||.||.|
BPUM_3290___m 51 TCATGTCAAAGGAAAAGGAATTGTGTTAAATGAACCATCTGTGGTAGCTC 100
BSNT_05560___ 101 TTGATAAAAACAGCGGCAAAGTGCTGGCGGTTGGCGAAGAGGCAAGACGA 150
||||.|||||||||||.|||||..||||.|||||.||||||||.|||||.
BPUM_3290___m 101 TTGACAAAAACAGCGGGAAAGTTTTGGCTGTTGGAGAAGAGGCGAGACGT 150
BSNT_05560___ 151 ATGGTTGGACGTACACCTGGGAATATTGTTGCGATTCGCCCGCTGAAAGA 200
||||||||||||||.|||||||||||||||||||||||.||..|.|||||
BPUM_3290___m 151 ATGGTTGGACGTACGCCTGGGAATATTGTTGCGATTCGTCCATTAAAAGA 200
BSNT_05560___ 201 CGGAGTTATTGCTGACTTTGAAGTAACAGAAGCAATGCTGAAACATTTTA 250
.||.||.||||||||.|||||||||||.|||||.|||||.||.|||||||
BPUM_3290___m 201 TGGCGTAATTGCTGATTTTGAAGTAACTGAAGCGATGCTCAAGCATTTTA 250
BSNT_05560___ 251 TTAACAAGCTGAATGTAAAAGGCCTGTTCTCAAAGCCGCGCATGCTCATT 300
|||||....|.|||||.|||||.||.|||||.||.|||||.||||||||.
BPUM_3290___m 251 TTAACTCATTAAATGTGAAAGGGCTATTCTCTAAACCGCGTATGCTCATC 300
BSNT_05560___ 301 TGCTGCCCGACGAATATTACATCCGTTGAGCAAAAAGCAATTAAAGAAGC 350
|||||||||||.||.||||||||.||||||||.||.||.||.||||||||
BPUM_3290___m 301 TGCTGCCCGACAAACATTACATCTGTTGAGCAGAAGGCGATCAAAGAAGC 350
BSNT_05560___ 351 TGCAGAAAAAAGCGGCGGGAAACATGTGTACCTTGAAGAAGAACCTAAAG 400
|||.||||||||||||||.||.|||||.|..|||||||||||.||.||||
BPUM_3290___m 351 TGCTGAAAAAAGCGGCGGAAAGCATGTATTTCTTGAAGAAGAGCCAAAAG 400
BSNT_05560___ 401 TTGCCGCTATCGGCGCGGGTATGGAAATATTCCAGCCAAGCGGTAACATG 450
|.||.|||||.||.||.||||||||.||.||.||||||||.||.||||||
BPUM_3290___m 401 TAGCAGCTATTGGTGCTGGTATGGATATTTTTCAGCCAAGTGGAAACATG 450
BSNT_05560___ 451 GTTGTAGACATCGGAGGCGGGACGACGGATATCGCGGTTATTTCAATGGG 500
||.|||||.||.||||||||.|||||.||||||||.||.||.||||||||
BPUM_3290___m 451 GTCGTAGATATTGGAGGCGGAACGACAGATATCGCTGTCATCTCAATGGG 500
BSNT_05560___ 501 CGATATTGTCACCTCCTCTTCTATTAAAATGGCTGGGGACAAGTTTGACA 550
.||.|||||.|||.||||||||||||||||||||||.|||||.|||||..
BPUM_3290___m 501 TGACATTGTAACCGCCTCTTCTATTAAAATGGCTGGAGACAAATTTGATC 550
BSNT_05560___ 551 TGGAAATCTTAAATTATATCAAACGCGAGTACAAGCTGCTGATCGGCGAA 600
|||||||..|.|||||.||.|||...||||||||||||.|||||||.|||
BPUM_3290___m 551 TGGAAATTCTCAATTACATTAAAAAAGAGTACAAGCTGTTGATCGGTGAA 600
BSNT_05560___ 601 CGTACTGCGGAGGATATTAAGATTAAAGTCGCAACTGTTTTCCCAGACGC 650
||.||.||.||||||||||||||..||||.|||||.||.|||||||||||
BPUM_3290___m 601 CGCACGGCTGAGGATATTAAGATCCAAGTTGCAACGGTATTCCCAGACGC 650
BSNT_05560___ 651 ACGTCACGAGGAAATTTCCATTCGCGGACGGGACATGGTTTCCGGTCTTC 700
|||||||||.||.|||||.|||||.|||||.||||||||..|.||..|.|
BPUM_3290___m 651 ACGTCACGAAGAGATTTCAATTCGTGGACGAGACATGGTGACAGGATTAC 700
BSNT_05560___ 701 CAAGAACAATTACAGTAAACAGTAAAGAAGTTGAAGAAGCCCTTCGTGAA 750
|||||||.|||||.||.|..||.|||||.||.||||||||..|.||||||
BPUM_3290___m 701 CAAGAACGATTACCGTCACAAGCAAAGAGGTAGAAGAAGCATTGCGTGAA 750
BSNT_05560___ 751 TCTGTCGCTGTTATTGTTCAGGCTGCGAAACAAGTGCTCGAAAGAACACC 800
|||||..|||..|||||||||||||||||||||||.||.||.||||||||
BPUM_3290___m 751 TCTGTATCTGCGATTGTTCAGGCTGCGAAACAAGTTCTTGAGAGAACACC 800
BSNT_05560___ 801 GCCTGAACTTTCTGCTGATATTATTGACCGCGGCGTTATTATTACCGGCG 850
|||||||.|.||.||||||||||||||.||||||||.||||||||.||.|
BPUM_3290___m 801 GCCTGAATTATCAGCTGATATTATTGATCGCGGCGTCATTATTACAGGTG 850
BSNT_05560___ 851 GAGGCGCGC-TCTTAAACGGCCTTGACCAGCTGCTTGCTGAAGAGCTGAA 899
|.||.||.| |||| |||||.|||||.||..|||||||.|||||||||||
BPUM_3290___m 851 GCGGAGCTCTTCTT-AACGGGCTTGATCAATTGCTTGCAGAAGAGCTGAA 899
BSNT_05560___ 900 GGTACCGGTCCTCGTTGCTGAAAATCCTATGGATTGCGTAGCCATCGGCA 949
.|||||.||..||||.|||||.|||||.||||||||.|||||..|.||.|
BPUM_3290___m 900 AGTACCTGTTTTCGTGGCTGAGAATCCGATGGATTGTGTAGCTGTTGGTA 949
BSNT_05560___ 950 CAGGTGTCATGCTTGATAATATGGACAAGCTTCCTAAACGCAAACTAAGC 999
|.||.||.|||||||||||||||||||||||.||.||.||.|||||.|||
BPUM_3290___m 950 CTGGCGTGATGCTTGATAATATGGACAAGCTGCCAAAGCGTAAACTCAGC 999
BSNT_05560___ 1000 TGA 1002
|.|
BPUM_3290___m 1000 TAA 1002
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