Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05557 and BPUM_3288

See DNA alignment / Visit BSNT_05557 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_05557___flhP.1.24716.seq
#    -bsequence pep-align/BPUM_3288___flhP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05557___flhP-BPUM_3288___flhP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05557___flhP-BPUM_3288___flhP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05557___flhP
# 2: BPUM_3288___flhP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     164/273 (60.1%)
# Similarity:   220/273 (80.6%)
# Gaps:           5/273 ( 1.8%)
# Score: 848.0
# 
#
#=======================================

BSNT_05557___      1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFD     50
                     |||:|:.|:.::|::|:|:|.||:|::||.||||:||:|.||||:||||:
BPUM_3288___f      1 MLRTMINAAVSMNEVQKQLDIISNNIANSETTGYRAKNTRFSELIRQQFN     50

BSNT_05557___     51 QVDEKNEEVAKARKTPPGLRLGVGAMMNSRLVSDQGSIQKTDRDLDIAFT    100
                     ||||||.:||.:|.||.|||||.|.|:|:.:.|.||||::|.||||:||.
BPUM_3288___f     51 QVDEKNAQVANSRLTPDGLRLGTGTMVNASINSLQGSIKETGRDLDVAFG    100

BSNT_05557___    101 SPYQYLQVNVNGNRQYTRDGALYVTPSAANANQLQLVTGNGYPVLDENGN    150
                     :|.||:||||.||.:|||||:||:.| ..|.||:||||..|:|:||||||
BPUM_3288___f    101 APSQYMQVNVGGNIRYTRDGSLYLQP-GNNRNQVQLVTSEGHPILDENGN    149

BSNT_05557___    151 TVNIDSSMKNITINKNGTLTA--SDGNAVQRFNLGVVQVNNPQELKSEGN    198
                     .:.::::.::|:|:|||.|||  .|....|:.|||||||||...|.|||:
BPUM_3288___f    150 EIVLNANFRDISIDKNGRLTAISRDNQPNQQVNLGVVQVNNSSALVSEGD    199

BSNT_05557___    199 NLFSIDNA--AAFEELNGANRQNIGMQQGSLEMSNVDISEQMTDLITSQR    246
                     ||||:|..  .|...|||||||.|.:|||:||.||||:|:::|||:|:||
BPUM_3288___f    200 NLFSVDGTYQGALTALNGANRQAIQLQQGALETSNVDMSKELTDLMTTQR    249

BSNT_05557___    247 SYQLNSRTITMGDQMLGLINSVR    269
                     |||:||||||||||||||:|::|
BPUM_3288___f    250 SYQMNSRTITMGDQMLGLVNTIR    272


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