Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05537 and BPUM_3279

See DNA alignment / Visit BSNT_05537 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence pep-align/BSNT_05537___ywqA.1.24716.seq
#    -bsequence pep-align/BPUM_3279___ywqA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05537___ywqA-BPUM_3279___ywqA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05537___ywqA-BPUM_3279___ywqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05537___ywqA
# 2: BPUM_3279___ywqA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 925
# Identity:     710/925 (76.8%)
# Similarity:   813/925 (87.9%)
# Gaps:           3/925 ( 0.3%)
# Score: 3785.0
# 
#
#=======================================

BSNT_05537___      1 MASLKEILIHVEQMEDGSFTLSAFDENEQPLPYNHMKKHLFQWHESSFYG     50
                     |...|:|:||.||.||.|||:||..|:..|:|.|.||:.|||||||||||
BPUM_3279___y      1 MTRHKQIVIHAEQTEDFSFTISAQAEDGHPVPLNEMKRQLFQWHESSFYG     50

BSNT_05537___     51 TFLEDVSFIGTTAVLLSPWMTVELLGKNSFNSFSSVQLTEETEPLIEAAS    100
                     |||||||||||.|.|||||||||||||||||:||.|.||||||||::.||
BPUM_3279___y     51 TFLEDVSFIGTPAFLLSPWMTVELLGKNSFNTFSHVTLTEETEPLMKTAS    100

BSNT_05537___    101 TIYEFIADGDFLPDYDAWTNGVFRWKDRDNILEGFTAEWFSAAVQDYIQY    150
                     ||||||.|.||:|||:|||.||.|:||::.:|:|:||||||.||||||||
BPUM_3279___y    101 TIYEFIEDEDFIPDYEAWTKGVLRFKDKEGLLDGYTAEWFSFAVQDYIQY    150

BSNT_05537___    151 DDELREKWEHIKEKSPAVTSFRGHFLDEEDFLEGIGWIDDQSPFTVGLRL    200
                     ||.|:.||..:.|:|||::||:||||||:||||.||||||.:||||||||
BPUM_3279___y    151 DDALQHKWNRMTEQSPALSSFQGHFLDEQDFLETIGWIDDDTPFTVGLRL    200

BSNT_05537___    201 NEPDFDGDDWKIEMFLRDKKSGAVEFFDRLKSLKKSWQAYSDKIAREQDR    250
                     |||||||||||||:||||||:..:.||:.::|||:||..|.|||:||.:|
BPUM_3279___y    201 NEPDFDGDDWKIELFLRDKKNSDLHFFEGIRSLKRSWHPYQDKISRELER    250

BSNT_05537___    251 FHRTVPWLSFDSGTTLISEEEAWIFLSEASETLVDMGVEILLPSWWQIVR    300
                     |.:.||||||.|||||:||:|||:||||||||||:||:|||||||||||:
BPUM_3279___y    251 FGQIVPWLSFTSGTTLMSEDEAWLFLSEASETLVNMGIEILLPSWWQIVK    300

BSNT_05537___    301 DSNMMLKAKVSSSPRGESFVGMNALLDFNWRFATNGIELTEDEFNELVAS    350
                     :|.|||||::||:|||||.|||:||:||||||||||||||||||||||.|
BPUM_3279___y    301 ESTMMLKARISSTPRGESHVGMDALMDFNWRFATNGIELTEDEFNELVQS    350

BSNT_05537___    351 NRRLVNIRGQWVKIDPQFIKQMKRLMEKAESEGLHMSDILARELMDQQDG    400
                     .||||||||||:||||.||:|||:.||:||:|||||||||:|||.||:..
BPUM_3279___y    351 KRRLVNIRGQWIKIDPTFIQQMKKWMERAENEGLHMSDILSRELADQEAS    400

BSNT_05537___    401 GLEDSDLIDTSAFAGIQFDLSKQLRSLIRKLTAAENLPEHEVSPSFKGTL    450
                     .....:|:|:||||.|||:||.|||.|:.:|.....||.:|:|.||||||
BPUM_3279___y    401 SESIPELLDSSAFAHIQFELSSQLRGLVHQLNDTHELPSYEMSDSFKGTL    450

BSNT_05537___    451 RPYQKYGMNWLLFLRESGFGACLADDMGLGKTIQMIAYFLHVKESGRQKT    500
                     ||||::|:|||||||..||||||||||||||||||||||.::||......
BPUM_3279___y    451 RPYQQHGVNWLLFLRSHGFGACLADDMGLGKTIQMIAYFTYLKEQESNAA    500

BSNT_05537___    501 PHLIIAPTSVLGNWQRELQTFAPDLSVALHYGPRRPKGDDFAAHYENADV    550
                     |.||||||||||||||||:||||.|:|||||||.||:|:.|...||:.|:
BPUM_3279___y    501 PSLIIAPTSVLGNWQRELETFAPHLNVALHYGPSRPQGEHFTKAYESTDI    550

BSNT_05537___    551 VLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLHH    600
                     |||||||||:|.:||:|..|:||||||||||||||||||||||:|||.||
BPUM_3279___y    551 VLTSYGLSHSDRDELTSAKWDTICLDEAQNIKNAHTKQSRAIRQLKGQHH    600

BSNT_05537___    601 IALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRI    650
                     |||||||||||||||||||||:|||||||||.|||::||||||||:||||
BPUM_3279___y    601 IALSGTPMENRLTELWSIFDFVNKGYLGSLTSFHKKFVLPIEKDREEKRI    650

BSNT_05537___    651 GQLQQLIRPFLLRRTKRDEEVALNLPEKLEEKEFIPLSAEQASLYEQLVK    700
                     .||||||:||||||||:|||||||||||||||||||||||||||||||||
BPUM_3279___y    651 EQLQQLIKPFLLRRTKQDEEVALNLPEKLEEKEFIPLSAEQASLYEQLVK    700

BSNT_05537___    701 DTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTEL-LAGRSV    749
                     |||:||.|||||||||:|||||||||||||||||||||..|:: |..||:
BPUM_3279___y    701 DTFEHMASLTGMQRKAIILSMLGRLKQICDHPALYLKESGTDVKLLKRSL    750

BSNT_05537___    750 KLEKLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGS    799
                     |::||.||:.||..|.||||||||||.||||:|:|.||.|||||||||||
BPUM_3279___y    751 KMDKLAELLKAIHEQGESCLIFTQYIGMGNMIKQLAEKMFGEPVQFLNGS    800

BSNT_05537___    800 LSKQERDTLVEKFQRKEYPTLILSLKAGGTGLNLTAANHVIHYDRWWNPA    849
                     |||||||.:|::||:||:..||||||||||||||||||||||||||||||
BPUM_3279___y    801 LSKQERDKMVDRFQKKEFNILILSLKAGGTGLNLTAANHVIHYDRWWNPA    850

BSNT_05537___    850 VENQATDRAYRIGQERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQS    899
                     ||||||||||||||:|||||||||||||||||||.|||:|||||||||||
BPUM_3279___y    851 VENQATDRAYRIGQKRFVHVHKMITTGTIEEKIDQMLETKQTLNDQIIQS    900

BSNT_05537___    900 ENWITELSTQELEELFTLSATAQ--    922
                     |:|||||||.|||:||||||.||  
BPUM_3279___y    901 ESWITELSTNELEDLFTLSAAAQSS    925


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05537 and BPUM_3279

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
