Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05536 and BPUM_3278
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence pep-align/BSNT_05536___ywqB.1.24716.seq
# -bsequence pep-align/BPUM_3278___ywqB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05536___ywqB-BPUM_3278___ywqB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05536___ywqB-BPUM_3278___ywqB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05536___ywqB
# 2: BPUM_3278___ywqB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 289/536 (53.9%)
# Similarity: 388/536 (72.4%)
# Gaps: 1/536 ( 0.2%)
# Score: 1548.0
#
#
#=======================================
BSNT_05536___ 1 MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAV 50
|||:.|:::::..:|||:|||||..:||.||||||||.|||||||||:..
BPUM_3278___y 1 MLQHNINEEELKQTAEQIKELLPATDENKQLIKKALITYRQDSVYRLKQE 50
BSNT_05536___ 51 SPTEVTAYVQDVVPVRVTLNLFVIVKSGCSCPSGRICRHMLAVFLYVYAM 100
|.||.:|||.|||..||..::...|:|.||||:..:|:|:||||..:||.
BPUM_3278___y 51 SDTEWSAYVHDVVAARVHFHVLFPVRSSCSCPADGLCKHILAVFFSLYAQ 100
BSNT_05536___ 101 FERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEF 150
.|.|..|||.|.|:::|:.||||:|:.||.| .|:|:||.|||.||..||
BPUM_3278___y 101 VESVTGFTENWSEKDELQRSKELIRQHFQVK-RPDEQSLQSWLNFFQEEF 149
BSNT_05536___ 151 SLWQARTPEGSQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLR 200
:||..|||:..|..|.|||||||.||||||:.||.||||.||::|.||||
BPUM_3278___y 150 NLWLKRTPKHQQTPQHLYYGYLSILKKHAPHSPEFKSLYAIHTSIDVWLR 199
BSNT_05536___ 201 MFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTYALSFALDPFL 250
::.||:.|:|:.|:|:||:||||||||:||:.|:|.||||||||:|||||
BPUM_3278___y 200 IYELIDLGQLDAEKDYYSMNPYVEQLMNTIFDSVDHLKTYALSFSLDPFL 249
BSNT_05536___ 251 DKTPDVIRPLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEA 300
:.||..:|.||.....||:||:.||.|||..:|:|.|||.:|.|:||...
BPUM_3278___y 250 ENTPTAVRTLLQINGPFQHERVAVFMEIWGTILNRGKWVKKETELLKNAQ 299
BSNT_05536___ 301 GRRFSPELQFGRLHLEFLQKNDDVIFAEADQFPPEALPYTFQWLSEMTAK 350
.:..:.|...|.:|:::|.|.||.:|.:......:.||....||.::|.:
BPUM_3278___y 300 QQEKTVERTIGLMHMDYLLKEDDHLFQQLKMLNADMLPNVLNWLKDLTNR 349
BSNT_05536___ 351 KDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTND 400
|||||||.||::|..|...|.:||..::|:|..:.:.|..|:||.:||.|
BPUM_3278___y 350 KDWKRLKLWYEEITYILEEYCQLDLSYRELRGAVSDFFYYLDAYFKQTKD 399
BSNT_05536___ 401 QALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGLSINEMDKMM 450
..|:||:...|:||.|||||..||.::|||||||||||||.||:|::|.:
BPUM_3278___y 400 HHLYERYLQICMPYAFTEYSQLLYAQQRYAEWIEIHSLVGFSISELEKDL 449
BSNT_05536___ 451 LKEIAASDPEALIPAYHREVAFFIDQKNRSSYKEAARYLKKLRTLYKKAK 500
:|:||..:||||||:||||::..:||||||:|:|:.:.||||||||.|.|
BPUM_3278___y 450 IKQIAKEEPEALIPSYHREISQLLDQKNRSAYRESVKMLKKLRTLYHKTK 499
BSNT_05536___ 501 KQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES 536
|..:||||::.|....|||||.|||::||||||...
BPUM_3278___y 500 KTTIWERYVKQLQDSTKRLRAFQEEMKKGKLIDDTP 535
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