Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05535 and BPUM_3277

See DNA alignment / Visit BSNT_05535 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence pep-align/BSNT_05535.1.24716.seq
#    -bsequence pep-align/BPUM_3277.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05535-BPUM_3277.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05535-BPUM_3277.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05535
# 2: BPUM_3277
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 55
# Identity:      33/55 (60.0%)
# Similarity:    41/55 (74.5%)
# Gaps:           8/55 (14.5%)
# Score: 175.0
# 
#
#=======================================

BSNT_05535         1 MEAERKKKMSEKKLNQEEFLKILMHAHEIGEQSSEMTTKEMLENLISHIK     50
                             |..|.|||||||||||:||:|||.|:::||||||||||:||:
BPUM_3277          1 --------MDNKGLNQEEFLKILMYAHDIGENSNDVTTKEMLENLIAHIR     42

BSNT_05535        51 NGYAT     55
                     ||..:
BPUM_3277         43 NGLVS     47


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