Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05535 and BPUM_3277
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_05535.1.24716.seq
# -bsequence dna-align/BPUM_3277.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05535-BPUM_3277.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05535-BPUM_3277.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05535
# 2: BPUM_3277
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity: 112/168 (66.7%)
# Similarity: 112/168 (66.7%)
# Gaps: 24/168 (14.3%)
# Score: 416.0
#
#
#=======================================
BSNT_05535 1 ATGGAAGCTGAAAGGAAAAAAAAGATGAGTGAAAAGAAATTGAATCAAGA 50
|.|||.||.||.|.| |||||||||||
BPUM_3277 1 -----------ATGGATAATAAGGGT-------------TTGAATCAAGA 26
BSNT_05535 51 AGAATTTCTGAAAATTTTGATGCATGCACATGAAATTGGTGAGCAGTCAT 100
|||.|||.|.||||||||||||.|.||.|||||.|||||||||.|.|||.
BPUM_3277 27 AGAGTTTTTAAAAATTTTGATGTACGCTCATGATATTGGTGAGAATTCAA 76
BSNT_05535 101 CTGAGATGACGACGAAGGAAATGCTTGAAAATTTGATTTCTCATATTAAA 150
.|||..|.||.||.||.|||||||||||||||.|||||.||||||||..|
BPUM_3277 77 ATGATGTCACAACAAAAGAAATGCTTGAAAATCTGATTGCTCATATTCGA 126
BSNT_05535 151 AATGGATATGCAACATAA 168
|||||...||...|||||
BPUM_3277 127 AATGGTCTTGTTTCATAA 144
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