Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05530 and BPUM_3276
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence pep-align/BSNT_05530___ywqF.1.24716.seq
# -bsequence pep-align/BPUM_3276___ywqF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05530___ywqF-BPUM_3276___ywqF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05530___ywqF-BPUM_3276___ywqF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05530___ywqF
# 2: BPUM_3276___ywqF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 259/441 (58.7%)
# Similarity: 322/441 (73.0%)
# Gaps: 3/441 ( 0.7%)
# Score: 1320.0
#
#
#=======================================
BSNT_05530___ 1 MNITVIGTGYVGLVTGVSLSEIGHHVTCIDIDAHKIDEMRKGISPIFEPG 50
|||.:.|.|||||||||.|:|.||:|.|||||..||.::::|..|::|||
BPUM_3276___y 1 MNIAIAGCGYVGLVTGVCLAEAGHNVACIDIDRRKIMQLKQGRPPMYEPG 50
BSNT_05530___ 51 LEELMRKNTADGRLNFEKSYEKGLAQADIIFIAVGTPQKSDGHANLEQIT 100
|:||:::|.|.||:.|..:.|....|||::.|||||||::||.|:|:.:.
BPUM_3276___y 51 LKELLKRNLAQGRIQFHINGEVAYPQADVLMIAVGTPQQADGQADLQYVL 100
BSNT_05530___ 101 DAAKRIAKHVKRDTVVVTKSTVPVGTNDLINGLITEHLAEPVSISVASNP 150
.|||.|....|...|:|.||||||||.|.|..:|.:.|.....:|:||||
BPUM_3276___y 101 QAAKEIGTKAKSGAVLVVKSTVPVGTGDQIEQMIHQELGRKEPLSIASNP 150
BSNT_05530___ 151 EFLREGSAIYDTFHGDRIVIGTADEKTANTLEELFRPFQIPIYQTDIRSA 200
|||||||||.||...||:|||...:...:.|||::..|.:|:.:||.:||
BPUM_3276___y 151 EFLREGSAISDTLRADRLVIGAETKAVLDRLEEMYADFHLPVVKTDRKSA 200
BSNT_05530___ 201 EMIKYASNAFLATKISFINEISNICEKVGADIEAVAYGMGQDKRIGSQFL 250
|||||||||||||||||:|||::||||.|||:|.||.|||.|:||||.||
BPUM_3276___y 201 EMIKYASNAFLATKISFMNEIASICEKTGADVEWVAQGMGLDQRIGSSFL 250
BSNT_05530___ 251 KAGIGYGGSCFPKDTNALVQIAGNVEHDFELLKSVIKVNNNQQAMLVDKA 300
|||||||||||||||||||||||:|.|||||||:||||||.|:|..:...
BPUM_3276___y 251 KAGIGYGGSCFPKDTNALVQIAGHVSHDFELLKAVIKVNNEQRAGFIRSI 300
BSNT_05530___ 301 LNRLG-GVTGKTIALLGLSFKPNTDDMREAPSIVIADRLAALDARIRAYD 349
..||| .:.||.||||||:|||||||||||||:.||..|..|.|.:.|||
BPUM_3276___y 301 QERLGANLEGKRIALLGLAFKPNTDDMREAPSVPIAHELHQLGAELVAYD 350
BSNT_05530___ 350 PIAVGHAKHVLPQAVEYKETIEEAVKGSDAVMILTDWADIKQFPLAAYQD 399
|:|..||...||..|.:..|||||:|...||.|||:|.:|:.|||.:|::
BPUM_3276___y 351 PVASRHAARELPDQVVFAHTIEEAIKDVHAVCILTEWTEIQTFPLKSYKE 400
BSNT_05530___ 400 LMESPLIFDGRNCYTLDEAAAVGVEYYSVGRKAVVPSGAIQ 440
.|..|||||||||:||:.|...||||:|:||:.|.|...
BPUM_3276___y 401 WMRQPLIFDGRNCHTLEAAEQAGVEYHSIGRRPVSPIYM-- 439
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