Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05510 and BPUM_3275
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_05510___ywrA.1.24716.seq
# -bsequence pep-align/BPUM_3275___ywrA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05510___ywrA-BPUM_3275___ywrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05510___ywrA-BPUM_3275___ywrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05510___ywrA
# 2: BPUM_3275___ywrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 127/179 (70.9%)
# Similarity: 157/179 (87.7%)
# Gaps: 2/179 ( 1.1%)
# Score: 713.0
#
#
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BSNT_05510___ 1 -MISIYLFMAFFIANLLGYGGGPASIPLMFEEVVNRYSWLSNDQFSNMLA 49
|:.::||.|||::||||||||||||||.:||:||.:.|::|:.||||||
BPUM_3275___y 1 MMLILFLFWAFFLSNLLGYGGGPASIPLNYEEIVNHFHWMTNEGFSNMLA 50
BSNT_05510___ 50 LANALPGPIATKIAAYVGYSAGGWPGFLIALIATVVPSALALIVLLRIIQ 99
|||||||||||||||||||...|||||::||:|||:|||:.||:||::|.
BPUM_3275___y 51 LANALPGPIATKIAAYVGYDVMGWPGFIVALLATVLPSAIGLILLLKLID 100
BSNT_05510___ 100 RFRQSPVIKGMTLSVQPVIAVMMLILTWQISADGIKAIGWIQSIVIAGIS 149
|||||||:||||||||||||:|||:|||:|..|.:|||||:||:.||.||
BPUM_3275___y 101 RFRQSPVVKGMTLSVQPVIAMMMLLLTWEIGGDAVKAIGWMQSLAIAAIS 150
BSNT_05510___ 150 LLAMTKFKMHPAFLIIAAFLYGGLVIPHF 178
...|||:||||||||:|||||||.::||
BPUM_3275___y 151 FFFMTKYKMHPAFLIVAAFLYGGFILPH- 178
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