Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05507 and BPUM_3273

See DNA alignment / Visit BSNT_05507 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_05507___ywrC.1.24716.seq
#    -bsequence pep-align/BPUM_3273___ywrC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05507___ywrC-BPUM_3273___ywrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05507___ywrC-BPUM_3273___ywrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05507___ywrC
# 2: BPUM_3273___ywrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     133/170 (78.2%)
# Similarity:   147/170 (86.5%)
# Gaps:          12/170 ( 7.1%)
# Score: 686.0
# 
#
#=======================================

BSNT_05507___      1 ------------MSHEYQIPNLVLDETDKQILTILHEEGRISYTDLGKRV     38
                                 :|::|.||||.|||.|||||::|||:||:|||||||:|
BPUM_3273___y      1 MLKYQQKKGGHTVSNDYSIPNLTLDERDKQILSLLHEDGRMSYTDLGKQV     50

BSNT_05507___     39 DLSRVAVQARINQLIEAGVIEKFTAVINPAKIGIHVSVFFNVEVEPQFLE     88
                     .||||||||||.|||||||||:||.|||||||||||||||||||||:|||
BPUM_3273___y     51 GLSRVAVQARIQQLIEAGVIERFTTVINPAKIGIHVSVFFNVEVEPKFLE    100

BSNT_05507___     89 EVALKLEEEPAVTSLYHMTGPSKLHMHGIFANDQEMEEFLTKRLYPLRGV    138
                     .|||:||:|.||||||||||||||||||||.|:||||.||||:||||.||
BPUM_3273___y    101 AVALQLEQETAVTSLYHMTGPSKLHMHGIFQNEQEMETFLTKKLYPLEGV    150

BSNT_05507___    139 VSVDCQMLIKRYKSRMGMKL    158
                     ||||||||||||||||||||
BPUM_3273___y    151 VSVDCQMLIKRYKSRMGMKL    170


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