Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05487 and BPUM_3271

See DNA alignment / Visit BSNT_05487 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_05487___alsS.1.24716.seq
#    -bsequence pep-align/BPUM_3271___alsS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05487___alsS-BPUM_3271___alsS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05487___alsS-BPUM_3271___alsS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05487___alsS
# 2: BPUM_3271___alsS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 575
# Identity:     384/575 (66.8%)
# Similarity:   460/575 (80.0%)
# Gaps:          13/575 ( 2.3%)
# Score: 1999.0
# 
#
#=======================================

BSNT_05487___      1 MLTKATKEQKSLVKNRGAELVVDCLVEQGVTHVFGIPGAKIDAVFDALQD     50
                          ...|...:..|||||:||.|:.|||||||.|||||||||||.|:|
BPUM_3271___a      1 -----MNSQAQPLTRRGAELIVDTLIAQGVTHVFAIPGAKIDAVFDVLKD     45

BSNT_05487___     51 KGPEIIVARHEQNAAFMAQAVGRLTGKPGVVLVTSGPGASNLATGLLTAN    100
                     :|||:::.||||||||||.|||||||||||.|||||||||||||||||||
BPUM_3271___a     46 RGPELVLCRHEQNAAFMAAAVGRLTGKPGVCLVTSGPGASNLATGLLTAN     95

BSNT_05487___    101 TEGDPVVALAGNVIRADRLKRTHQSLDNAALFQPITKYSVEVQDVKNIPE    150
                     |||||:||:|||||||||||||||||||||||:|:||||||||||.||||
BPUM_3271___a     96 TEGDPIVAIAGNVIRADRLKRTHQSLDNAALFKPVTKYSVEVQDVHNIPE    145

BSNT_05487___    151 AVTNAFRIASAGQAGAAFVSFPQDVVNEVTNTKNVRAVAAPKLGPAADDA    200
                     |:|||||.|..|||||||:|||||||.|.|....|.|..:|:||||.|..
BPUM_3271___a    146 ALTNAFRAAQKGQAGAAFISFPQDVVTEHTTQTPVSAHPSPELGPAPDAL    195

BSNT_05487___    201 ISAAIAKIQTAKLPVVLVGMKGGRPEAIKAVRKLLKKVQLPFVETYQAAG    250
                     ||:||||||.|.|||.:||||..||.|.||.|.|||.:.:|||||||.||
BPUM_3271___a    196 ISSAIAKIQNAHLPVAIVGMKASRPAAAKATRTLLKTLGIPFVETYQGAG    245

BSNT_05487___    251 TLSRDLEDQYFGRIGLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNVN    300
                     .|||:||.||.||||||||||||||:|||||:|:||:||||||||.||:.
BPUM_3271___a    246 VLSRELESQYVGRIGLFRNQPGDLLIEQADVLLSIGFDPIEYDPKHWNIQ    295

BSNT_05487___    301 -GDRTIIHLDEIIADIDHAYQPDLELIGDIPSTINHIEHDAVKVEFAERE    349
                      ..|.|||:|::.|||||.|:|.|||:|:|..||.|:.||:|::...:.:
BPUM_3271___a    296 PKQRQIIHVDDMQADIDHFYEPALELVGNIAETIKHLAHDSVQLSLCKEQ    345

BSNT_05487___    350 QKILSDLKQYMHEGEQVPADWKSDRAHPLEIVKELRNAVDDHVTVTCDIG    399
                     .:.:::|::.:.:.|:.| :.:|..:|||:::..||..:.|...||||||
BPUM_3271___a    346 VEFVTELQELLSDIEKAP-ERESHLSHPLDVIHTLRRLIPDDTKVTCDIG    394

BSNT_05487___    400 SHAIWMSRYFRSYEPLTLMISNGMQTLGVALPWAIGASLVKPGEKVVSVS    449
                     ||||||||:||.|||.|.::|||||||||||||||.||::.|.||:||||
BPUM_3271___a    395 SHAIWMSRHFRVYEPNTFLVSNGMQTLGVALPWAIAASILNPDEKIVSVS    444

BSNT_05487___    450 GDGGFLFSAMELETAVRLKAPIVHIVWNDSTYDMVAFQQLKKYNRTSAVD    499
                     |||||||||||||||||:|..:||:||||||||||||||..||:|||.|:
BPUM_3271___a    445 GDGGFLFSAMELETAVRMKTNLVHLVWNDSTYDMVAFQQEMKYDRTSCVE    494

BSNT_05487___    500 FGNIDIVKYAESFGATGLRVESPDQLADVLRQGMNAEGPVIIDVPVDYSD    549
                     ||.||:||||||||||||||.||::|:.||::|:|.|||||||:|:||.|
BPUM_3271___a    495 FGQIDLVKYAESFGATGLRVNSPEELSTVLQKGINIEGPVIIDIPIDYQD    544

BSNT_05487___    550 NINLASDKLPKEFGELMKTKAL---    571
                     |.:|||.|.|:.|.|   |..|   
BPUM_3271___a    545 NPDLASQKWPEVFRE---THTLNVR    566


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05487 and BPUM_3271

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
