Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05502 and BPUM_3269
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_05502___ywrF.1.24716.seq
# -bsequence pep-align/BPUM_3269___ywrF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05502___ywrF-BPUM_3269___ywrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05502___ywrF-BPUM_3269___ywrF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05502___ywrF
# 2: BPUM_3269___ywrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 134/205 (65.4%)
# Similarity: 163/205 (79.5%)
# Gaps: 5/205 ( 2.4%)
# Score: 718.0
#
#
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BSNT_05502___ 1 MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSSEGAVNAAPFSFYNVV 50
.||||.|:.||||||:::||||||:|:||.:..||||||||:||:
BPUM_3269___y 1 -----MDQLSRKEAYKLLSGSIVPRPIAFITSLSKDDIVNAAPFSFFNVI 45
BSNT_05502___ 51 SSDPPLLSISVNRTEGRQKDTARNAVENGEFVVHVSDEAIIEDINETAAS 100
|..||||::|:.|.||:.||||::.::.|||||||||||||||||||||:
BPUM_3269___y 46 SGHPPLLAVSIGRREGQMKDTAQHVIDRGEFVVHVSDEAIIEDINETAAT 95
BSNT_05502___ 101 LRPDESELTRTSLHPVESKAVSVPGIKEARVRFECKLERHITFDNDQGIT 150
|..:||||.||.||.|:|..||||||:|||:||||:||:|:||.||:|..
BPUM_3269___y 96 LPQEESELDRTGLHQVQSHVVSVPGIQEARIRFECRLEKHLTFQNDEGEI 145
BSNT_05502___ 151 TADLLIGRVVCFHLDEKVYDAEKGYILTDELKPASRLAGNHYAKLGEEFT 200
|.|.:||||||.||||.||||||||:.|.||||.:|||||.||.||..|.
BPUM_3269___y 146 TVDHIIGRVVCAHLDEAVYDAEKGYVSTHELKPVARLAGNDYAHLGTSFV 195
BSNT_05502___ 201 LIRPS 205
|.||.
BPUM_3269___y 196 LKRPE 200
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