Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05479 and BPUM_3266
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence pep-align/BSNT_05479___rbsA.1.24716.seq
# -bsequence pep-align/BPUM_3266___rbsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05479___rbsA-BPUM_3266___rbsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05479___rbsA-BPUM_3266___rbsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05479___rbsA
# 2: BPUM_3266___rbsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity: 389/493 (78.9%)
# Similarity: 437/493 (88.6%)
# Gaps: 0/493 ( 0.0%)
# Score: 1988.0
#
#
#=======================================
BSNT_05479___ 1 MQIEMKDIHKAFGKNQVLSGVSFQLLPGEVHALMGENGAGKSTLMNILTG 50
|.|||.:||||||||.|||||||.|:.|||||||||||||||||||:|||
BPUM_3266___r 1 MNIEMHNIHKAFGKNTVLSGVSFDLVTGEVHALMGENGAGKSTLMNLLTG 50
BSNT_05479___ 51 LHKSDQGQISINGNETYFSNPKEAEQHGIAFIHQELNIWPEMTVLENLFI 100
|:..|||.|:|:..||.|.|||||||||||||||||||||:|||||||||
BPUM_3266___r 51 LYSLDQGTINIDEKETAFKNPKEAEQHGIAFIHQELNIWPDMTVLENLFI 100
BSNT_05479___ 101 GKEISSKLGVLQTRKMKALAKEQFDKLSVSLSLDQEAGECSVGQQQMIEI 150
|||:.:|.|:|.|:|||.||:.|.|:|||:||||:|||.|||||:|||||
BPUM_3266___r 101 GKELYTKFGLLDTKKMKVLAQSQLDRLSVNLSLDEEAGSCSVGQKQMIEI 150
BSNT_05479___ 151 AKALMTNAEVIIMDEPTAALTEREISKLFEVITALKKNGVSIVYISHRME 200
||||||:|:||||||||||||||||.|||:||.:|||.||||||||||||
BPUM_3266___r 151 AKALMTDAKVIIMDEPTAALTEREIEKLFQVIESLKKEGVSIVYISHRME 200
BSNT_05479___ 201 EIFAICDRITIMRDGKTVDTTNISETDFDDVVKKMVGRELTERYPKRTPS 250
||||||||||||||||||||..|.||:|.:|||||||||||:|||:||||
BPUM_3266___r 201 EIFAICDRITIMRDGKTVDTKAIPETNFHEVVKKMVGRELTDRYPERTPS 250
BSNT_05479___ 251 LGDKVFEVKNASVKGSFEDVSFYVRSGEIVGVSGLMGAGRTEMMRALFGV 300
|||.:.|||.||.||.|:|:||.|::|||||::||||||||||||:|||:
BPUM_3266___r 251 LGDTILEVKQASRKGQFQDISFSVKAGEIVGIAGLMGAGRTEMMRSLFGL 300
BSNT_05479___ 301 DRLDTGEIWIAGKKTAIKNPQEAVKKGLGFITENRKDEGLLLDTSIRENI 350
|.||.||||:.|||..||.|.:|||.|:|||||:||||||:||.||||||
BPUM_3266___r 301 DSLDQGEIWVHGKKAVIKKPSDAVKLGIGFITEDRKDEGLMLDASIRENI 350
BSNT_05479___ 351 ALPNLSSFSPKGLIDHKREAEFVDLLIKRLTIKTASPETHARHLSGGNQQ 400
.||||.|||||||||.|.|.:|||||||||||||||.|..||.|||||||
BPUM_3266___r 351 GLPNLKSFSPKGLIDKKNEQDFVDLLIKRLTIKTASSEISARSLSGGNQQ 400
BSNT_05479___ 401 KVVIAKWIGIGLKVLILDEPTRGVDVGAKREIYTLMNELTERGVAIIMVS 450
||||||||||..|||||||||||||||||||||.||||||:|||||:|||
BPUM_3266___r 401 KVVIAKWIGIQPKVLILDEPTRGVDVGAKREIYQLMNELTDRGVAILMVS 450
BSNT_05479___ 451 SELPEILGMSDRIIVVHEGRISGEIHAREATQERIMTLATGGR 493
||||||||||||::|:|||.||||::..:|||||||||||||:
BPUM_3266___r 451 SELPEILGMSDRVLVIHEGTISGEVNKADATQERIMTLATGGK 493
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