Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05478 and BPUM_3265

See DNA alignment / Visit BSNT_05478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_05478___rbsD.1.24716.seq
#    -bsequence pep-align/BPUM_3265___rbsD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05478___rbsD-BPUM_3265___rbsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05478___rbsD-BPUM_3265___rbsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05478___rbsD
# 2: BPUM_3265___rbsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      79/131 (60.3%)
# Similarity:   103/131 (78.6%)
# Gaps:           1/131 ( 0.8%)
# Score: 403.0
# 
#
#=======================================

BSNT_05478___      1 MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPA     50
                     |||:||||||:||:||||||||.|||||.|||:|:|.:||||||..|.|:
BPUM_3265___r      1 MKKNGILNSHIAKVLADLGHTDTIVIADCGLPIPEGPVKIDLSLTIGTPS     50

BSNT_05478___     51 FQDTAAVLAEEMAVEKVIAAAEIKASNQENARFLENLFSEQEIEYLSHEE    100
                     ||:..::|.:|||||.:..|:||:.:|:.:..||:..|| :.:..:.||.
BPUM_3265___r     51 FQEVTSLLLQEMAVEHITVASEIQEANERDHLFLKKAFS-KPLHDVDHET     99

BSNT_05478___    101 FKLLTKEAKAVIRTGEFTQYANCILQAGVLF    131
                     ||.:||:|||||||||.|.||||||.|||:|
BPUM_3265___r    100 FKDMTKQAKAVIRTGEATPYANCILHAGVIF    130


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