Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05469 and BPUM_3256

See DNA alignment / Visit BSNT_05469 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence pep-align/BSNT_05469___ywtC.1.24716.seq
#    -bsequence pep-align/BPUM_3256___ywtC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05469___ywtC-BPUM_3256___ywtC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05469___ywtC-BPUM_3256___ywtC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05469___ywtC
# 2: BPUM_3256___ywtC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      36/56 (64.3%)
# Similarity:    46/56 (82.1%)
# Gaps:           1/56 ( 1.8%)
# Score: 185.0
# 
#
#=======================================

BSNT_05469___      1 MKFVKAIWPFVAVAIVFMFMSAFKFNDQLTDQEKQKIDMEMNKIQQQEE-     49
                     |||:||.|||||:.:||:|||||||:|.|||.|||||.:||.||:||:: 
BPUM_3256___y      1 MKFLKASWPFVALILVFVFMSAFKFSDSLTDHEKQKISVEMQKIEQQKQS     50

BSNT_05469___     50 PVNANK     55
                     ...|:|
BPUM_3256___y     51 KTEASK     56


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