Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05469 and BPUM_3256
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence dna-align/BSNT_05469___ywtC.1.24716.seq
# -bsequence dna-align/BPUM_3256___ywtC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05469___ywtC-BPUM_3256___ywtC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05469___ywtC-BPUM_3256___ywtC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05469___ywtC
# 2: BPUM_3256___ywtC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 128/179 (71.5%)
# Similarity: 128/179 (71.5%)
# Gaps: 19/179 (10.6%)
# Score: 436.0
#
#
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BSNT_05469___ 1 ATGAAATTTGTCAAAGCTATCTGGCCGTTTGTTGCCGTAGCCATCGTGTT 50
|||||||||.|.|||||.|.|||||||||||||||..||....|.||.||
BPUM_3256___y 1 ATGAAATTTCTAAAAGCCAGCTGGCCGTTTGTTGCGTTAATTTTAGTCTT 50
BSNT_05469___ 51 CATGTTTATGTCAGCTTTTAAATTCAATGATCAG-CTGACAGATCAGGAA 99
..|.||||||||.|||||||||||.|.||| ||| ||.||||||||.|||
BPUM_3256___y 51 TGTCTTTATGTCTGCTTTTAAATTTAGTGA-CAGCCTCACAGATCATGAA 99
BSNT_05469___ 100 AAACAGAAGA------TTGATATG--GAAA--TGAATAAAATCCAACAGC 139
|||||.|||| ||||.||| |||| ||||.|| |||.|.|
BPUM_3256___y 100 AAACAAAAGATCTCGGTTGAAATGCAGAAAATTGAACAA----CAAAAAC 145
BSNT_05469___ 140 AGGAAGAACCGGTAAATGCCAATAAATAA 168
||..|.||.||| |.||.|.|||||||
BPUM_3256___y 146 AGTCAAAAACGG---AAGCAAGTAAATAA 171
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