Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05468 and BPUM_3255
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence pep-align/BSNT_05468___ywtD.1.24716.seq
# -bsequence pep-align/BPUM_3255___ywtD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05468___ywtD-BPUM_3255___ywtD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05468___ywtD-BPUM_3255___ywtD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05468___ywtD
# 2: BPUM_3255___ywtD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 457
# Identity: 214/457 (46.8%)
# Similarity: 288/457 (63.0%)
# Gaps: 54/457 (11.8%)
# Score: 1167.5
#
#
#=======================================
BSNT_05468___ 1 MRHSLFICPAYSFCKNIKKSLNIFKKIPMLKLQKEEEIIKVNTLANWKKF 50
..||
BPUM_3255___y 1 --------------------------------------------MKWK-- 4
BSNT_05468___ 51 LLVAVII--CFLVPIMTKAEIAEADTSSELIVSEAKNLLGYQYKYGGETP 98
.::| |.||.:|..:: :||.:.:...:.:|:.|:|..|..||..|
BPUM_3255___y 5 ---GIVIGGCALVGLMFMSQ-SEAASQTASPLQQAEKLIGSPYHKGGTDP 50
BSNT_05468___ 99 KEGFDPSGLIQYVF-SKADIHLPRSVNDQYKIGTAVKPENLKPGDILFFK 147
|.|||.||..|||: :.....|||.|.|||:||..:..:..:|||:::|:
BPUM_3255___y 51 KTGFDASGFTQYVYKTSGAFDLPRKVIDQYQIGKKISWDKAQPGDLVYFR 100
BSNT_05468___ 148 KEGSNGSVPTHDALYIGDGQMVHSTQSKGVIITNYKKSSYWSGTYIGARR 197
.......:|||.|||.|:.|::|.|.|:||:.|:..||.||:..:...:|
BPUM_3255___y 101 SLEETKDIPTHVALYAGNDQVIHITLSQGVVKTDVSKSKYWTDRFYAVKR 150
BSNT_05468___ 198 IAADPATADVPVVQEAEKYIGVPYVFGGSTPSEGFDCSGLVQYVFQQALG 247
:...|..:|..:|::|.||:|:|||||.:.|..||||||.:||||:::||
BPUM_3255___y 151 LPGTPEISDHRLVKDAMKYLGIPYVFGAADPKIGFDCSGFLQYVFEKSLG 200
BSNT_05468___ 248 IYLPRSAEQQWAVGEKIAPQNIKPGDVVYFSNTYKTGISHAGIYAGAGRF 297
|||||||||||.||||:|..:|:|||.|:||||||.||||.|:|.|..||
BPUM_3255___y 201 IYLPRSAEQQWMVGEKVALDDIRPGDFVFFSNTYKPGISHVGMYIGGDRF 250
BSNT_05468___ 298 IQASRSEKVTISYLSEDYWKSKMTGIRRFDNLTIPKENPIVSEATLYVGE 347
|.|||||.||:|||||.||:.|.||.:|...|.:.|||||||:|..|:||
BPUM_3255___y 251 IHASRSESVTVSYLSESYWREKWTGAKRLTELKLAKENPIVSKAATYIGE 300
BSNT_05468___ 348 VPYKQGGVTPETGFDTAGFVQYVYQKAAGISLPRYATSQYNAGTKIKKAD 397
|||.:||..|:.|||||||.||||::..||.|||||:.|...||.:|:::
BPUM_3255___y 301 VPYVKGGTNPKQGFDTAGFTQYVYREVLGIELPRYASGQVKTGTPVKRSE 350
BSNT_05468___ 398 LKPGDIVFFQSTSLNPSIYIGNGQVVHVTLSNGVTITNMNTSTYWKDKYA 447
|||||:|||..|||.|:||.|:.||:|||:||||.:|||.|||||||||.
BPUM_3255___y 351 LKPGDLVFFSGTSLMPAIYAGSNQVIHVTVSNGVVLTNMKTSTYWKDKYE 400
BSNT_05468___ 448 GSIRVQ- 453
.::|::
BPUM_3255___y 401 TAVRIKK 407
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