Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05466 and BPUM_3254

See DNA alignment / Visit BSNT_05466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence pep-align/BSNT_05466___ywtE.1.24716.seq
#    -bsequence pep-align/BPUM_3254___ywtE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05466___ywtE-BPUM_3254___ywtE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05466___ywtE-BPUM_3254___ywtE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05466___ywtE
# 2: BPUM_3254___ywtE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     194/300 (64.7%)
# Similarity:   226/300 (75.3%)
# Gaps:          14/300 ( 4.7%)
# Score: 996.0
# 
#
#=======================================

BSNT_05466___      1 --------MKCIAIDLDGTLLNKESVISAENREAIKRAVDAGILVTICTG     42
                             .|.|||||||||||.:|.|||:||.|:.||.:||.:||||||
BPUM_3254___y      1 MKEDLTAMKKMIAIDLDGTLLNTKSEISAQNRAALIRAKEAGYIVTICTG     50

BSNT_05466___     43 RATFDVKALLDDLDIPIIAANGGTIHDTGYRLISRTLMDQEAGKAIADYL     92
                     |||||||.||.|||||||||||||:|..||.|.||..:||||||..|..|
BPUM_3254___y     51 RATFDVKELLGDLDIPIIAANGGTVHTEGYELFSRITLDQEAGKRAAKAL    100

BSNT_05466___     93 LSKNIYFEVYTDDHLLSPFDGKAKLHAELDILKSANPNEQTDELWQGAMT    142
                     :.:||||||||||.||||||||.||.||.|::|||||||...:||:||||
BPUM_3254___y    101 VERNIYFEVYTDDALLSPFDGKEKLKAEFDVIKSANPNEDIADLWEGAMT    150

BSNT_05466___    143 QFKQFGIKPIPHIESVFEGGENIYKLLCFSFDMDKLKQAKEELKHHKKLA    192
                     |||||||||:..|..:||..|..||||||||||:||::|::.|....:|:
BPUM_3254___y    151 QFKQFGIKPVDDIRQIFESNEATYKLLCFSFDMNKLQEARDLLSEMPELS    200

BSNT_05466___    193 QTSSGKHIIEILPASSGKGRALTKLADIYGIETQDIYAIGDSPNDLSMFE    242
                     .|||||||||:||..||||.||.|||..||::...|||||||||||||||
BPUM_3254___y    201 LTSSGKHIIEVLPKESGKGHALKKLAAHYGVDRSHIYAIGDSPNDLSMFE    250

BSNT_05466___    243 VSGHRIAMENAIDELKEKSTFVTKSNDENGVAYFIDQLLSGQYA------    286
                     .:||||||.||:|.:|||||::||.|.|:|||||||.||..|:.      
BPUM_3254___y    251 EAGHRIAMGNAVDVIKEKSTYMTKGNHEDGVAYFIDLLLKNQFHEKKTLV    300


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