Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05460 and BPUM_3249
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_05460___gerBB.1.24716.seq
# -bsequence pep-align/BPUM_3249___gerBB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05460___gerBB-BPUM_3249___gerBB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05460___gerBB-BPUM_3249___gerBB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05460___gerBB
# 2: BPUM_3249___gerBB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity: 177/370 (47.8%)
# Similarity: 251/370 (67.8%)
# Gaps: 6/370 ( 1.6%)
# Score: 906.0
#
#
#=======================================
BSNT_05460___ 1 MRQSEDKLTFMQTLIMVSSTMIGAGVLTLSRSAAETDSPIGWIMILLQGV 50
|.::| ||:.:|..|:.||||||||:||:.||:|.:..|.|||::|:|||
BPUM_3249___g 1 MYRAE-KLSLLQVTILCSSTMIGAGILTIPRSSANSGFPDGWIIVLIQGV 49
BSNT_05460___ 51 IFIIFSLLFLPFLQRNSGKTIFELNSIAAGKVVGFFLNVFISLYFIGIVC 100
||...:.|.....::|:..||||.|...||.:.|.|.|:.:.:|.:|||.
BPUM_3249___g 50 IFAFVAFLLGWIAEKNAPDTIFESNRKGAGAIFGTFFNLILIVYLLGIVG 99
BSNT_05460___ 101 FQTRILGEVVGFFLLKNTPMAVVVIIFLAVAIYHVAGGVYPIAKVYAYIF 150
|:.|:|||||.||||::|||||:|:|||.|||||:..|::||.|:..||:
BPUM_3249___g 100 FEARVLGEVVQFFLLESTPMAVIVMIFLLVAIYHLKSGIFPIVKMVTYIY 149
BSNT_05460___ 151 PITIIIFLMLLMFSFRLFQLDFIRPVFEGGFQSFFSLFPKTLLYFSGFEI 200
|:|:||::.|::||.::|..|::|||...||:.|..||.:|.:.|:|||:
BPUM_3249___g 150 PMTMIIYIGLMLFSLKIFDFDYLRPVMAHGFRDFSKLFSQTFIQFTGFEV 199
BSNT_05460___ 201 IFYLVPFMKDPK--QVKKAVAFGIVTSTVFYSITLFIVIGCMSVAEAKTV 248
|.::||.:...| :.|.|.|.|:..:::.||:|||:|||.|:|.|.|::
BPUM_3249___g 200 ILFVVPLIYKDKWSKAKWAAAIGVGITSLIYSLTLFVVIGSMTVGETKSL 249
BSNT_05460___ 249 TWPTISLIHALEIPGIFIERFDLFLQLTWTAQQFACMLGSFKGAHIGLTD 298
||||:|||.|||:.|:||||||:||...||.|||.||||.|:.|..|...
BPUM_3249___g 250 TWPTVSLIQALELEGVFIERFDIFLLTIWTCQQFICMLGFFQFAIKGCHT 299
BSNT_05460___ 299 IFHLKNKNNPWLLTALLAVTFFLSMFPEDLNAVFYYGTLLGYIFLGIIVI 348
:| |..|...||..|..:|..||:||.::|.||||.|||||....::.:
BPUM_3249___g 300 VF--KTTNVTRLLWLLFLITSALSLFPRNINEVFYYSTLLGYALFVVLAV 347
BSNT_05460___ 349 PFFIWFLSWIQKKLGRGQLQ 368
||....|..|:||.|....
BPUM_3249___g 348 PFITAILLMIRKKWGGRSA- 366
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