Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03297 and BPUM_3246

See DNA alignment / Visit BSNT_03297 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_03297___kduI.1.24716.seq
#    -bsequence pep-align/BPUM_3246___kduI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03297___kduI-BPUM_3246___kduI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03297___kduI-BPUM_3246___kduI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03297___kduI
# 2: BPUM_3246___kduI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 275
# Identity:     194/275 (70.5%)
# Similarity:   237/275 (86.2%)
# Gaps:           0/275 ( 0.0%)
# Score: 1090.0
# 
#
#=======================================

BSNT_03297___      1 MENRYSVHPEQVKRFTTEELRSHFLMDSLFTENKLTMYYSHEDRVVIGGA     50
                     |||||:|||||||||||||||.||.:.:||...:|.:||||||||||||.
BPUM_3246___k      1 MENRYAVHPEQVKRFTTEELRRHFHIPTLFVSGELKLYYSHEDRVVIGGV     50

BSNT_03297___     51 APGQSELKLDAGDFIKTDFFLERREIGIINVGQPGAVRVGDDEYVLQTKD    100
                     .|....||||||||::|::|||||||||:|||..|.|.|..:.:||:.||
BPUM_3246___k     51 MPSAEPLKLDAGDFLRTEYFLERREIGIVNVGGQGTVTVDGEAFVLEHKD    100

BSNT_03297___    101 FLYIGMGNQDVSFPSLNGEKAKFYFVSACAHKSYPTQKAALAELTPDRLG    150
                     |||||:|::||.|.|.:||:||||.|||.||::|||||||:|||||:.||
BPUM_3246___k    101 FLYIGLGHEDVQFASASGEEAKFYLVSATAHQAYPTQKAAIAELTPNHLG    150

BSNT_03297___    151 DDAASNVRSLYKVIHQDGIKSCQLMMGITMLDQNNNWNTMPAHVHDRRME    200
                     :.:|||||:||:|||.:||:|||||||||.|:.||.|||||||:||||||
BPUM_3246___k    151 EASASNVRNLYQVIHANGIQSCQLMMGITQLETNNTWNTMPAHIHDRRME    200

BSNT_03297___    201 AYLYLDLEKDSKVFHFMGQPDETRHLVVGNEQAVLSPAWSIHSGAGTSNY    250
                     .|||||:|:|::||||||:|.||||||:.||:||:|||||||||:||:||
BPUM_3246___k    201 VYLYLDIEEDARVFHFMGEPSETRHLVLANEEAVISPAWSIHSGSGTANY    250

BSNT_03297___    251 SFVWAMAGENYTFTDMDLIPMDGLK    275
                     ||:||||||||||.|||.:|||.|:
BPUM_3246___k    251 SFIWAMAGENYTFKDMDFVPMDQLR    275


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.