Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03294 and BPUM_3244

See DNA alignment / Visit BSNT_03294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_03294___kdgK.1.24716.seq
#    -bsequence pep-align/BPUM_3244___kdgK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03294___kdgK-BPUM_3244___kdgK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03294___kdgK-BPUM_3244___kdgK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03294___kdgK
# 2: BPUM_3244___kdgK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity:     214/338 (63.3%)
# Similarity:   257/338 (76.0%)
# Gaps:          14/338 ( 4.1%)
# Score: 1109.0
# 
#
#=======================================

BSNT_03294___      1 MK-LDAVTFGESMAMFYANEYGGLHEVSTFSKGLAGAESNVACGLARLGF     49
                     || |||||||||||||||.|.|.||:|.||.|.|||||||||.|||||||
BPUM_3244___k      1 MKALDAVTFGESMAMFYAKEAGELHQVHTFQKALAGAESNVAVGLARLGF     50

BSNT_03294___     50 RMGWMSKVGNDQLGTFILQELKKEGVDVSRVIRSQDENPTGLLLKSKVKE     99
                     .:|||||||.|.||||||:||:|||||.|.||||.|...||:||||||.:
BPUM_3244___k     51 DVGWMSKVGADSLGTFILEELQKEGVDTSAVIRSNDGAKTGILLKSKVMD    100

BSNT_03294___    100 GDPQVTYYRKNSAASTLTSAEYPRDYFQCAGHLHVTGIPPALSAEMKDFT    149
                     |||.||||||.|||||::.:::|.||||.|||||:||||||||:||:.|:
BPUM_3244___k    101 GDPDVTYYRKGSAASTMSPSDFPADYFQQAGHLHMTGIPPALSSEMRAFS    150

BSNT_03294___    150 YHVMNDMRNAGKTISFDPNVRPSLWPDQATMVHTINDLAGLADWFFPGIA    199
                     :|.:..|:.||||||||||:|..||.::..|:||:|.:|...||||||:|
BPUM_3244___k    151 FHALQKMKEAGKTISFDPNLRLQLWEEEEDMIHTVNQIAYQVDWFFPGLA    200

BSNT_03294___    200 EGELLTGEKTPEGIADYYLKKGASFVAIKLGKEGAYFKTGTSEGFLEGCR    249
                     ||:.|||...||.|||.||:||...|.||||.||||:|:..::|.:.|..
BPUM_3244___k    201 EGQRLTGCHEPEEIADVYLQKGVKLVVIKLGAEGAYYKSAANQGMVSGFY    250

BSNT_03294___    250 VDRVVDTVGAGDGFAVGVISGVLDGLSYKDAVQRGNAIGALQVQAPGDMD    299
                     |..||||||||||||||||||:|||||.:.:|:||||:|||.|.:|||.|
BPUM_3244___k    251 VPNVVDTVGAGDGFAVGVISGLLDGLSCEKSVRRGNAVGALAVMSPGDKD    300

BSNT_03294___    300 GLPTREKLASFLSAQRTVHQK---KGDY----------    324
                     ||||||:|.||:...:..|::   |||.          
BPUM_3244___k    301 GLPTREELQSFIKEAKRYHRREYMKGDEGYGEVSKFER    338


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