Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03293 and BPUM_3243
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_03293___kdgA.1.24716.seq
# -bsequence pep-align/BPUM_3243___kdgA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03293___kdgA-BPUM_3243___kdgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03293___kdgA-BPUM_3243___kdgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03293___kdgA
# 2: BPUM_3243___kdgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 114/199 (57.3%)
# Similarity: 144/199 (72.4%)
# Gaps: 3/199 ( 1.5%)
# Score: 584.0
#
#
#=======================================
BSNT_03293___ 1 ---MESKVVENRLKEAKLIAVIRSKDTQEACQQIESLLDKGIRAVEVTYT 47
..|..|:.||...|||||:|:....|..:.|:.|..||:||:|||||
BPUM_3243___k 1 MGKSASLSVKERLAACKLIAVVRAGSESEGIEIIQRLKKKGVRAIEVTYT 50
BSNT_03293___ 48 TPGASDIIESFRNREDILIGAGTVITAQQAGEAAEAGAQFIVSPGFSADL 97
||.|..||.||::.:|:::||||:.|.|||..|.:||:|||||||:.:.:
BPUM_3243___k 51 TPNAERIIASFQHEQDLIVGAGTITTLQQAQSAIDAGSQFIVSPGYLSVI 100
BSNT_03293___ 98 AEHLSFVKTHYIPGVLTPSEIMEALTFGFTTLKLFPSGVFGIPFMKNLAG 147
.|||||..|.|:||||||||||:|...|:..|||||||.||:.:||||.|
BPUM_3243___k 101 GEHLSFHDTLYVPGVLTPSEIMQAKAAGYCLLKLFPSGSFGLSYMKNLQG 150
BSNT_03293___ 148 PFPQVTFIPTGGIHPSEVPDWLRAGAGAVGVGSQLGSCSKEDLQAVFQV 196
|||.:.|||||||||::||.||:|||.||||||||.|.:.|:||||...
BPUM_3243___k 151 PFPDIEFIPTGGIHPTDVPKWLKAGAVAVGVGSQLESSTAEELQAVLSS 199
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