Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01180 and BPUM_3240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_01180___yesM.1.24716.seq
# -bsequence pep-align/BPUM_3240.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01180___yesM-BPUM_3240.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01180___yesM-BPUM_3240.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01180___yesM
# 2: BPUM_3240
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 634
# Identity: 124/634 (19.6%)
# Similarity: 189/634 (29.8%)
# Gaps: 267/634 (42.1%)
# Score: 380.0
#
#
#=======================================
BSNT_01180___ 1 MKKRVAGWYRRMKIKDKLFVFLSLIMAVSFLFVYSGVQYAFHVYDEQIYR 50
BPUM_3240 0 -------------------------------------------------- 0
BSNT_01180___ 51 KSSEVLRMSSERIEDELKKIEDVSYEIITDEQIQRILSMQNRDDTYDQYQ 100
BPUM_3240 0 -------------------------------------------------- 0
BSNT_01180___ 101 MKQELWDQLAGYASDEKYIDSIHVIDARGSEYSAGNSSSDLLQQEQEEVC 150
BPUM_3240 0 -------------------------------------------------- 0
BSNT_01180___ 151 KRAKAKNGRNLWMTLGGSDPVLISARQIRSCHQLSLNGLGMVLIQVNVKQ 200
:..:||...
BPUM_3240 1 -----------------------------------------MYEKVNAYA 9
BSNT_01180___ 201 MIRD--VPKDWGDSVGDIMIADQGGNLVYTAHASAHVPEAAK-------- 240
:.:| ..|::..|...:...|| .|...|...|.:|...|
BPUM_3240 10 IEKDQQFAKEYLASKQKMKSYDQ--TLRKDAGLHAAIPSIEKYQYMMRTL 57
BSNT_01180___ 241 -----ETLKHPGYDLIKKNGK-----------RYFISYLQ---------- 264
.|:.| .|.|| |...||:|
BPUM_3240 58 INESDATMTH------VKEGKIKEYAASVKEVRTVSSYIQEQTMTLLDDE 101
BSNT_01180___ 265 -SSYQNWSYYNVIPFDQMFAKISFMKTVIGTC-FLLFFCVVLLFGRKIAN 312
|.|| ..|.::....|.:|..:. | |.|...|.|.....||.
BPUM_3240 102 LSEYQ-VLYQSLQKRHQTYALFTL-------CLFTLSIGVALWMAYMIAG 143
BSNT_01180___ 313 SITEPIEQLVTAMKSVQHSGIEAGVSLSLPEHTQDEAGMLNRHFTVMMKR 362
.|:.||..|..::|.|.....: |..|.:. ::||..:||..|..|.:.
BPUM_3240 144 GISRPIVHLSRSVKEVSEGNFD-GADLHVT--SKDEISVLNEAFQRMRQE 190
BSNT_01180___ 363 INELMEENVEKQLI---IKETELKALQAQINPHFLYNTLESINWLAKANQ 409
:..::||..:|..: ||:.:||.||.|:|||||:|||..::.:|....
BPUM_3240 191 MKMMIEEMKQKAALDQKIKDMKLKTLQNQMNPHFLFNTLNIVSRMAYLES 240
BSNT_01180___ 410 QKQISKMVESLGFLLRNSIHMKKDIVTIQEEADIVRHYMTIQRFRFEERL 459
....|::::|:..|:|.|:......||:::|..:|:.|..||..||.:|:
BPUM_3240 241 ADATSRLIQSVSTLMRYSLSALSASVTLEQEVKVVKEYFHIQETRFADRI 290
BSNT_01180___ 460 NFTLDIDDEVKHCLIPKLTLQPLAENAIQYALEPFTRPCAIRIQAKKTKG 509
.....||:.....|||.||||||.|||..:.:||......:.:...:..|
BPUM_3240 291 TCKTTIDESCLSVLIPSLTLQPLVENAFIHGVEPKEEDGLVELSIYQEGG 340
BSNT_01180___ 510 CVCITVEDNGPGM---------------DGRILESTDGRGIGLWNIRERI 544
.|.|.:.|||.|: |..||......||||.|:..|:
BPUM_3240 341 YVMIRIRDNGVGINEQERRRLLSEKDEEDPNILSKGHSTGIGLRNVISRL 390
BSNT_01180___ 545 SLTFGEPYGLRIQSEHEKGTRIVITIPCRNEVV- 577
.|.:|....|:|.|:..:||.|.:.||.:....
BPUM_3240 391 RLFYGVQNALQIDSKPNEGTTIQLAIPMKEGPAC 424
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