Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04831 and BPUM_3238
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence pep-align/BSNT_04831___yurO.1.24716.seq
# -bsequence pep-align/BPUM_3238.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04831___yurO-BPUM_3238.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04831___yurO-BPUM_3238.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04831___yurO
# 2: BPUM_3238
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity: 101/493 (20.5%)
# Similarity: 169/493 (34.3%)
# Gaps: 143/493 (29.0%)
# Score: 264.5
#
#
#=======================================
BSNT_04831___ 1 MKKMLLFLIIAAVSMFTIAGCSSQSSS----ADGKVTLKFFHRWPKEPEK 46
||..|.|.:: |:.|..|..|||.::| .||...|..|..|....|:
BPUM_3238 1 MKVKLGFTLL-ALCMLIITACSSTTNSDAKKEDGAEKLDIFSWWTGAGEE 49
BSNT_04831___ 47 SYFEEVVKEFEKEHPDIDIQIEAVLNDSYKDKIKV----MLGTTSPPDIY 92
...:.:::.||:::.||.|:..||...:..:...| |.|...|....
BPUM_3238 50 DGLKALIQLFEEKNKDIPIENAAVAGGAGTNAKAVLTSRMQGNDPPATFQ 99
BSNT_04831___ 93 FSWSDEFAFKFIRGNKALDLSSYYKNDTDWSSQLVQSQITPFTYENKQYG 142
.....|....::...|...|...|:.: .|..:..:|.|...:.:.|.|.
BPUM_3238 100 VHGGAELNESWVAAGKMEPLDDLYEKE-GWKDKFPESLIDLVSKDGKIYS 148
BSNT_04831___ 143 VPWQMD-AKSFFYNKDIFQKLNLDPPKTWDELIDVSKKLKEHGYTPISFG 191
||..:. ....:|||.:|....|:||.|:||....:..||:.|.||::.|
BPUM_3238 149 VPVNIHRGNVLWYNKKVFDDAGLEPPTTFDEFFKTADALKKKGITPLALG 198
BSNT_04831___ 192 TKATWTISH-----YIGTL-----------NQRMVDEKTREKDYNAKTGE 225
.|..|..:| .:|.| :.:|.|.|.:|
BPUM_3238 199 DKEPWAATHLFESVLLGVLGADDYQKLWAGDMKMDDAKVKE--------- 239
BSNT_04831___ 226 FTDEGYVKALEKLQELMPYFNKHVNSVDHEYVRQQFKSGKSAM-IYAETA 274
|.:....::.|.|...:|.:.:...|....|::|| :..:.|
BPUM_3238 240 --------AADIFGRMLEYVNDDHSSRNWQDASQLVAKGEAAMNVMGDWA 281
BSNT_04831___ 275 EIKLVEPVNLGM---FPFPEISGQKGSSEALT---GAPEGFMISSRTKHP 318
:...|..::|.: |.:....|.:||...:| |.|:| .:.|
BPUM_3238 282 KGYFVNDLDLKVNKDFGYVATPGTEGSFMVITDTFGLPKG------VEQP 325
BSNT_04831___ 319 KEAMEFLQFLTSKR-----------MGEKLVKDVGKY------------- 344
:...:||..|.|.. :..::..||.||
BPUM_3238 326 ENVKKFLSVLGSVEGQDAFNPLKGSIPARVDADVSKYDEYGKSAMKAFKE 375
BSNT_04831___ 345 -----SAVQGTATEE----------NATAIQREAVQHIVDAKSMVPWFDM 379
|...|:|.|| |....|:::.|.:...|..:.
BPUM_3238 376 SKLAPSLAHGSAAEEGFVTKANQAVNIFVTQKDSSQFVSSLKDSMK---- 421
BSNT_04831___ 380 DVDVEVADAYLTGVQQMLGGDMTPQQVMKAVQKAAKQVRASAE 422
BPUM_3238 421 ------------------------------------------- 421
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