Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04830 and BPUM_3237

See DNA alignment / Visit BSNT_04830 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence pep-align/BSNT_04830___yurN.1.24716.seq
#    -bsequence pep-align/BPUM_3237.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04830___yurN-BPUM_3237.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04830___yurN-BPUM_3237.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04830___yurN
# 2: BPUM_3237
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:      87/329 (26.4%)
# Similarity:   154/329 (46.8%)
# Gaps:          43/329 (13.1%)
# Score: 356.5
# 
#
#=======================================

BSNT_04830___      1 ---------------------MVNQNKIIPYLFLVPALVFL-LFVYIPIF     28
                                          ..:.::::..|||.|:.|.| :|||..|.
BPUM_3237          1 MRMDTSPITKTTTPKVKRVRRKWSGDQLLALLFLAPSAVLLFIFVYGFIG     50

BSNT_04830___     29 ENVFLSLFQWSSFSPEKTFIGLKNYVELFHDPVFYQALTNNVLYAVISIV     78
                     ...::||..|:|..|:.:|.||:||:.||.|..|...|.|.|.:.:..|.
BPUM_3237         51 WTGYVSLSNWTSLVPDFSFAGLQNYMMLFQDFRFQSDLRNTVFFTLFFIG    100

BSNT_04830___     79 CQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIYNP    128
                     ..:..||.||.:|:.|:  |....||.:||.|:.:|..|..:::.:|.||
BPUM_3237        101 AVIASGLALAILLDQKI--KGESLFRNLFFFPMALSFVVTGVVWQWILNP    148

BSNT_04830___    129 ETGLLNQLLQAIGLDQLTRAWLGDDS---------------TAMLSVIFV    163
                     .|| :|..|:.:|:..   .|..|.:               .||::|:..
BPUM_3237        149 STG-VNLFLKTLGIQP---KWYTDTNILAGFAWGKIEFGVPAAMIAVVIA    194

BSNT_04830___    164 SQWQSVGYIAMLYIVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEM    213
                     :.||..|:...:|:..::.||:|:.||||:|||.:.|.:..|..|..|.:
BPUM_3237        195 AVWQMTGFSLAMYLAGLRGIPEEVREAARMDGATEWQIYRKIIFPLLKPI    244

BSNT_04830___    214 SFVAVVMTLTGAFTVFNEPYILTGGGPGNASEVLSTFLYKSAFTEDMMGY    263
                     :...:::....:..:|:..|.:||.|....::|...::::..|..:....
BPUM_3237        245 TASVIIIMAHISLKIFDLIYSMTGPGANFVTDVPGVYMFEMTFRGNHYAG    294

BSNT_04830___    264 ASAIATVVLIITLALSLMQMKFFKTGKEE    292
                     .:|||.|:||......:..:...:.|...
BPUM_3237        295 GAAIAIVMLISVAVFIVPYLLSSRKGASS    323


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