Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04827 and BPUM_3236
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence pep-align/BSNT_04827.1.24716.seq
# -bsequence pep-align/BPUM_3236.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04827-BPUM_3236.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04827-BPUM_3236.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04827
# 2: BPUM_3236
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity: 55/274 (20.1%)
# Similarity: 95/274 (34.7%)
# Gaps: 113/274 (41.2%)
# Score: 281.0
#
#
#=======================================
BSNT_04827 0 -------------------------------------------------- 0
BPUM_3236 1 MTARWFVRPVLYALLILCSLFFLMPVYVMLVTSLKPLSEVTLEKMWALPS 50
BSNT_04827 0 -------------------------------------------------- 0
BPUM_3236 51 TLDFSSYQIAFEKLAPNLMNSLYLVIPATLLSAVLGAMNGYVLSKWRFKG 100
BSNT_04827 1 -----------MLTP-QVSLMPLYSIIQSLGLYNTYWALILPYAAYRIPF 38
|..| |..|:||...::.:||||:...|:|.:..|.:|.
BPUM_3236 101 SEVVFTLMLFGMFIPYQSILIPLIQFLREVGLYNSIPGLVLVHVVYGLPI 150
BSNT_04827 39 TIILIRSYFLSISKELEEAAYLDGCTSFGVFFRIFLPMSVPILVTSGILT 88
|.::.|::::||..|:.|:|.:||....|:|..:.||:|:...|...|..
BPUM_3236 151 TTLMFRNFYVSIPDEMIESAKMDGAGFIGIFRHMILPLSITGFVVVAIWQ 200
BSNT_04827 89 AYHTWNEFMFAIIFIDDENLRTIPAGLMQFRDALQTDWGVLLAGLTISAA 138
..:.||||:||:.....|: :.:...|.....:....|.|.:||..::|.
BPUM_3236 201 FTNVWNEFLFAVTMTTAEH-QPVMVALQNLSGSQIVQWNVQMAGAILAAL 249
BSNT_04827 139 PIIILFLLMQKYFVRGIASGSVKG 162
|.:::::|:.||||:|:.:|||||
BPUM_3236 250 PTLLVYILLGKYFVKGLLAGSVKG 273
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