Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05457 and BPUM_3235

See DNA alignment / Visit BSNT_05457 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:05
# Commandline: needle
#    -asequence pep-align/BSNT_05457___pmi.1.24716.seq
#    -bsequence pep-align/BPUM_3235___pmi.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05457___pmi-BPUM_3235___pmi.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05457___pmi-BPUM_3235___pmi.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05457___pmi
# 2: BPUM_3235___pmi
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     225/316 (71.2%)
# Similarity:   265/316 (83.9%)
# Gaps:           0/316 ( 0.0%)
# Score: 1274.0
# 
#
#=======================================

BSNT_05457___      1 MTQSPIFLTPVFKEKIWGGTALRDRFGYSIPSESTGECWAISAHPKGPST     50
                     |.||||||.|..||:|||||||||:|||.||||.|||||||||||.|||.
BPUM_3235___p      1 MKQSPIFLLPELKERIWGGTALRDQFGYDIPSEQTGECWAISAHPNGPSV     50

BSNT_05457___     51 VANGPYKGKTLIELWEEHREVFGGVEGDRFPLLKKLLDVKEGTSIKVHPD    100
                     |.:||||||||||||:.|||:|||:||||||||.|:||..:..|::||||
BPUM_3235___p     51 VQDGPYKGKTLIELWDNHRELFGGIEGDRFPLLTKILDANQDLSVQVHPD    100

BSNT_05457___    101 DYYAGENEEGELGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDW    150
                     |.||..:|.||||||||||||||||.||:||||:||::||||||:|||||
BPUM_3235___p    101 DDYAERHENGELGKTECWYIIDCKEGAEMIYGHSARTRTELVTMMNSGDW    150

BSNT_05457___    151 EGLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDYDRV    200
                     |||||.:||||||||||||||:||||:|.|||||||:||.|||||||:|.
BPUM_3235___p    151 EGLLRGVKIKPGDFYYVPSGTIHALCEGTLVLETQQSSDTTYRVYDYERK    200

BSNT_05457___    201 DDNGKPRELHFAKAVNAATVPHVDGYIDESTESRKGITIKTFVQGEYFSV    250
                     |.||..||||||:|::..||||||||.|||.|:|:|:||:|||:.|||||
BPUM_3235___p    201 DQNGHERELHFAQAIDVTTVPHVDGYADESVETRRGLTIRTFVEAEYFSV    250

BSNT_05457___    251 YKWDINGEAEMAQDESFLICSVIEGSGLLMYERETCPLKKGDHFIMPAQM    300
                     |||:|:...|::||..||:||||.|.|.|.::..|.||.||.|||:||:.
BPUM_3235___p    251 YKWEIDQAVELSQDYPFLLCSVISGEGALTHDGHTYPLPKGAHFILPAET    300

BSNT_05457___    301 PDFTIKGTCTLIVSHI    316
                     ..|:|:|.|.||||||
BPUM_3235___p    301 GSFSIEGNCELIVSHI    316


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