Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05454 and BPUM_3231

See DNA alignment / Visit BSNT_05454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:04
# Commandline: needle
#    -asequence pep-align/BSNT_05454___tagA.1.24716.seq
#    -bsequence pep-align/BPUM_3231___tagA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05454___tagA-BPUM_3231___tagA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05454___tagA-BPUM_3231___tagA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05454___tagA
# 2: BPUM_3231___tagA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     160/260 (61.5%)
# Similarity:   203/260 (78.1%)
# Gaps:           4/260 ( 1.5%)
# Score: 854.5
# 
#
#=======================================

BSNT_05454___      1 MLQTETVHHLAYVNGDLPGFLSHLEESFIDRNEGAFIATVNPEIGYAAAK     50
                      :|||.|.:|:||||||..|:|::....|.:..||.|||||||||||..|
BPUM_3231___t      1 -MQTEVVSNLSYVNGDLDEFISYMNHHHISQRRGAMIATVNPEIGYAVMK     49

BSNT_05454___     51 DKGYFKTVSSADFILPDGIGIVLTSRLINSRLKSRIAGYDVFINLLGLAD    100
                     |..|.:.|||||::||||:|:||.|||..|.|||||||:|||:::|.||:
BPUM_3231___t     50 DDAYHQVVSSADYVLPDGVGVVLMSRLTQSPLKSRIAGFDVFMSMLDLAN     99

BSNT_05454___    101 RKKKRVFLYGAKQEIIQAVADRLSTEYPGIELAGYSHGYVKDKDEVAKQI    150
                     ::.|.:||||||:|:::||..|:.||||.:.:||...||..||..|||||
BPUM_3231___t    100 KQSKSIFLYGAKKEVLEAVKQRIDTEYPNVVIAGSCDGYQADKRFVAKQI    149

BSNT_05454___    151 AAAKPDMVFVALGYPHQEKFIYEHKHLFPQAIAIGIGGSFDVFSGKVKRA    200
                     |.:|.||||||||||:||.||||::||||||:.||:|||||||||.||||
BPUM_3231___t    150 ARSKADMVFVALGYPNQENFIYEYRHLFPQAVCIGLGGSFDVFSGTVKRA    199

BSNT_05454___    201 PKIFIKLNLEWMYRLLTNPTRWKRMLNIPKYVFSVLKEERVQKQRHYYPE    250
                     |:..||.|.||:|||:.||.|||||||||||.|:||||.:.:|:  ||||
BPUM_3231___t    200 PRWMIKTNTEWLYRLVVNPWRWKRMLNIPKYAFAVLKENKGKKR--YYPE    247

BSNT_05454___    251 QIKEQSKIDV    260
                     |:|:|:|.. 
BPUM_3231___t    248 QVKDQTKQL-    256


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