Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02005 and BPUM_3229
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_02005.1.24716.seq
# -bsequence pep-align/BPUM_3229___tagE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02005-BPUM_3229___tagE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02005-BPUM_3229___tagE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02005
# 2: BPUM_3229___tagE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 697
# Identity: 114/697 (16.4%)
# Similarity: 197/697 (28.3%)
# Gaps: 341/697 (48.9%)
# Score: 448.5
#
#
#=======================================
BSNT_02005 0 -------------------------------------------------- 0
BPUM_3229___t 1 MDNNERLSVLIQTWFNKLRKKTHEDNQSQPQQQLQIPDMEYYFITGRIKE 50
BSNT_02005 0 -------------------------------------------------- 0
BPUM_3229___t 51 KYGGMTKSLLLRANLFGLKNISTHFLTFSYDQEFSQKVKGIFDKQIVDPN 100
BSNT_02005 0 -------------------------------------------------- 0
BPUM_3229___t 101 VTKIQNMYEDFLIPNCSPKEQYQPTYHAGNNKGSFDHEDPSVRMIRNEKS 150
BSNT_02005 1 MRLKFIDYRDLNLQRTHRVEYDLNGRKRREIIYNLQNNKPAFEKYYDING 50
.:::.:||...|.|...|.||:..|:..:...::.:..|...|.:...|.
BPUM_3229___t 151 NQIEIVDYFHPNQQLEKREEYNSQGQLHKVSYFSQETGKVYRELFIYENT 200
BSNT_02005 51 NCYLS-----------------VWVNSSGKRTKCVLHAGINKAFNHITDA 83
:.|:. :|.:..|.:| |.:..:.
BPUM_3229___t 201 HIYMKKGYADLKEEAKSKLRDIIWYSEEGIKT-----------FKNEKEL 239
BSNT_02005 84 HVYWVESILKDYTNPFLMLDELGLLD-------VFR-KVGNDCHKIVTLH 125
...|:.:| .|.|. ..:|.|:| ||: |..:..:....:|
BPUM_3229___t 240 RQEWLTTI--QYKND---RKKLFLVDSRKQDKYVFQLKKRSSSYFSAIIH 284
BSNT_02005 126 NTHLDKPHVKGSPYRRVYKEIFD--HKDEFDAIVFLTEEQKRDVEEDYGT 173
:.|.:: :.:..|..|.|:|. .|.:.||:.|:|||||.||.:.:|.
BPUM_3229___t 285 SKHYER---EKTELRSDYNELFTQVRKQKVDAVFFITEEQKTDVVKQFGH 331
BSNT_02005 174 DERFVVIPHAVTLDKGA-ILDKSIERNPKSAITLARLEDSKNIADGIRAF 222
...|.:.|| |||:.: .:......:|...:.:|||...||:.|.||:|
BPUM_3229___t 332 QNIFFLTPH--TLDRSSHQVQDHYTADPNKVLMMARLTKIKNVIDAIRSF 379
BSNT_02005 223 RIVVDEIKDAEYHIFGYGKEKENLQALIKDLHLENNVHIHGFTHNVNREI 272
..|:.|:.:|...|||.|.:::.|:..||.|.|.|||.:.|||.|.:.|.
BPUM_3229___t 380 EFVIKEVPNARLEIFGSGPQEKQLKQEIKRLDLGNNVFLKGFTQNPDAEF 429
BSNT_02005 273 QKHGLSIMTSRFEGFCLVIMESLANQTPVVSYRTKYGPETLIRDGKDGYL 322
:...:|:.||.|||..|.||||:.|..||::|...||..||:::..:|::
BPUM_3229___t 430 RTARMSLSTSIFEGCPLSIMESIVNNCPVITYNYDYGASTLVKNQFNGFV 479
BSNT_02005 323 VEYNNYEEAAEKVIELMKDSKLQKKFAKNSLDVYKRFSYARYKKNWLDLF 372
||....::.|.|:|||:|:.:..:.|::|..:..:.:|...|.:||....
BPUM_3229___t 480 VEQYEVKQLANKIIELLKNDEQYQIFSENCQETAEVYSIPNYYENWTTAL 529
BSNT_02005 373 KQLSK--------------------------------------------- 377
.::.:
BPUM_3229___t 530 HKMIEVREKRDQIQKMMKSIHFKLVGIDVEHHILSLDLHIEGAIEKRKKV 579
BSNT_02005 377 -------------------------------------------------- 377
BPUM_3229___t 580 ILELVGYDRHNHAELFSKKIENLKVSFPIGHASIQAALKRNKTKYVDFYI 629
BSNT_02005 377 ----------------------------------------------- 377
BPUM_3229___t 630 RMRDAEYNENIKRLPIAEHLLNEKDVSKVDGVSYKTIKGNYSWKVNK 676
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