Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05447 and BPUM_3220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence pep-align/BSNT_05447.1.24716.seq
# -bsequence pep-align/BPUM_3220___tagH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05447-BPUM_3220___tagH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05447-BPUM_3220___tagH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05447
# 2: BPUM_3220___tagH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 533
# Identity: 230/533 (43.2%)
# Similarity: 258/533 (48.4%)
# Gaps: 230/533 (43.2%)
# Score: 1171.0
#
#
#=======================================
BSNT_05447 1 MKLKVSFRNVSKQYQLYEKQSDKIKGLFFPNK-DKSFFAVRNVSFDVYEG 49
||||||||||||||.||:||||||||||.||| :|.|||||:||||||||
BPUM_3220___t 1 MKLKVSFRNVSKQYVLYKKQSDKIKGLFLPNKNEKGFFAVRDVSFDVYEG 50
BSNT_05447 50 ETIGFVGINGSGKSTMSNLLAKIIPPTSGEIEMNGQPSLIAISAGLNNAL 99
|||||||||||||||||||||||||||||||:|:||||||||:|||||.|
BPUM_3220___t 51 ETIGFVGINGSGKSTMSNLLAKIIPPTSGEIDMDGQPSLIAIAAGLNNQL 100
BSNT_05447 100 TGRDNIRLKCLMMGLTNKEIDEMYDSIVEFAEIGEFINQPVKSYSSGMKS 149
:|:|||||||||||||||||||:|:.|||||:||:||:||||||||||||
BPUM_3220___t 101 SGKDNIRLKCLMMGLTNKEIDELYEKIVEFADIGDFIDQPVKSYSSGMKS 150
BSNT_05447 150 RLGFAISVHIDPDILIIDEALSVGDQTFYDKCVDRITEFKNQGKTIFFVS 199
|||||||.|||||||||||||||||||||.||||||||||.|||||||||
BPUM_3220___t 151 RLGFAISAHIDPDILIIDEALSVGDQTFYQKCVDRITEFKEQGKTIFFVS 200
BSNT_05447 200 HSIGQIEKICDRVAWIDNGELRMFDDTKTVVKEYKEFISWFKKLSIKEKD 249
|||.||:||||||||:..||||||||||.||||||||:.||.|||.|||.
BPUM_3220___t 201 HSISQIQKICDRVAWMHYGELRMFDDTKKVVKEYKEFVDWFNKLSKKEKQ 250
BSNT_05447 250 KYKKEQLASRKKVLSEEDLAHPEKEKKKQKSLANIIPIAGLSILLVLAAG 299
||:.|....||.|...|.:...::..|::........:..:::|.:|.|.
BPUM_3220___t 251 KYQMEHKEGRKGVQKMEKVTRYKESGKRRSFFGPAFQVTIIAVLTILLAL 300
BSNT_05447 300 AMFV---------------------------------------------- 303
:||.
BPUM_3220___t 301 SMFSDRPLRTLATFGAIPSNKTEAPQSKNPLTKGAPDMKKVDQQTIVTAD 350
BSNT_05447 303 -------------------------------------------------- 303
BPUM_3220___t 351 PLTVYKDQAMKKKADVTLPFGQEVQAVAENKQTVQIKTASETYFVKPDGL 400
BSNT_05447 303 -------------------------------------------------- 303
BPUM_3220___t 401 QHAEELKALSIGPGQFNSYVSPASAGSYEYLLSFLGKEESVLKQKMQTLS 450
BSNT_05447 303 -------------------------------------------------- 303
BPUM_3220___t 451 SIKSEQGATIERLTTEKTDYVIENGQANTLVFREVMPISPSTLGLTEQNV 500
BSNT_05447 303 --------------------------------- 303
BPUM_3220___t 501 WLNEKQTKFAVKGEKNLFIIDNEQHTLTISVIK 533
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