Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05437 and BPUM_3218
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence pep-align/BSNT_05437.1.24716.seq
# -bsequence pep-align/BPUM_3218___mnaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05437-BPUM_3218___mnaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05437-BPUM_3218___mnaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05437
# 2: BPUM_3218___mnaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 229/387 (59.2%)
# Similarity: 266/387 (68.7%)
# Gaps: 67/387 (17.3%)
# Score: 1128.0
#
#
#=======================================
BSNT_05437 1 MKKLKVMTVFGTRPEAIKMAPLVLELRKYPQIESYVTVTAQHRQMLDQVL 50
||||.|||:|||||||||||||||||.|:|||.|.||||||||:||||||
BPUM_3218___m 1 MKKLNVMTIFGTRPEAIKMAPLVLELNKHPQINSIVTVTAQHREMLDQVL 50
BSNT_05437 51 EAFDLKPDFDLNIMKERQTLAEITSNALMKLDELFQSIKPDIVLVHGDTT 100
|||.:.||.||||||:||||:|||||||:|||:|||..||||||||||||
BPUM_3218___m 51 EAFSITPDHDLNIMKQRQTLSEITSNALLKLDQLFQEEKPDIVLVHGDTT 100
BSNT_05437 101 TTFAGSLAAYYHQISVGHVEAGLRTGNKYSPFPEELNRLLTGSIADFHFA 150
|||||||||:|||||||||||||||.||||||||||||.:||:|||.||:
BPUM_3218___m 101 TTFAGSLAAFYHQISVGHVEAGLRTHNKYSPFPEELNRQMTGTIADIHFS 150
BSNT_05437 151 PTEQAEKNLLHENKDPETIFVTGNTAIDALRTTVRDGYAHPVLEKIGSDK 200
|||:|::|||.|||..||||||||||||||:|||.:.|.||:||:||:||
BPUM_3218___m 151 PTEEAKQNLLIENKKEETIFVTGNTAIDALQTTVTEHYQHPILERIGTDK 200
BSNT_05437 201 MILLTAHRRENLGKPMENMFKAIRRIVEEFDGVQVVYPVHLNPAVREAAA 250
|:|||||||||||:||:|||:||||:||||:.||||||||||||||:||.
BPUM_3218___m 201 MVLLTAHRRENLGQPMKNMFRAIRRVVEEFEDVQVVYPVHLNPAVRDAAQ 250
BSNT_05437 251 KHFGDLDKVHLLEPLEVIDF----TTSLLKLTSSSPTRVGCRKKRRRLES 296
..|..||:|||:|||||:|| ..|...||.|... :....|
BPUM_3218___m 251 TEFSGLDRVHLIEPLEVVDFHNFAAASHFILTDSGGV-------QEEAPS 293
BSNT_05437 297 RSSCFAILRN------GQKAFGPVRLNWQERMKIRSIN------------ 328
......:||: |.|| |.::|...:...|..:.
BPUM_3218___m 294 LGKPVLVLRDTTERPEGVKA-GTLKLAGTDEETIYKMAKELLVDQKEYDS 342
BSNT_05437 328 ------------------------------------- 328
BPUM_3218___m 343 MSKASNPYGDGQASKRIVQELLHRFGLSEEKPVPFKS 379
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