Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05437 and BPUM_3218
See
Amino acid alignment /
Visit
BSNT_05437 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_05437.1.24716.seq
# -bsequence dna-align/BPUM_3218___mnaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05437-BPUM_3218___mnaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05437-BPUM_3218___mnaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05437
# 2: BPUM_3218___mnaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1171
# Identity: 708/1171 (60.5%)
# Similarity: 708/1171 (60.5%)
# Gaps: 215/1171 (18.4%)
# Score: 2307.5
#
#
#=======================================
BSNT_05437 1 ATGAAGAAACTAAAAGTCATGACAGTATTCGGCACGCGCCCTGAAGCCAT 50
.||||.||||||||.||.|||||..|.|||||.||..|.||||||||.||
BPUM_3218___m 1 GTGAAAAAACTAAATGTAATGACTATTTTCGGTACTAGACCTGAAGCGAT 50
BSNT_05437 51 AAAAATGGCGCCGCTCGTACTTGAATTAAGAAAATATCCTC----AAATT 96
.||||||||.||.||.||.||||||||||..|||.||||.| |||||
BPUM_3218___m 51 CAAAATGGCACCACTTGTCCTTGAATTAAATAAACATCCACAGATAAATT 100
BSNT_05437 97 GAGTCTTATGTGACGGTTACAGCCCAACATAGGCAAATGCTTGACCAGGT 146
.|.| |||.||.||.|||||||||||.||..||||||||||.||.||
BPUM_3218___m 101 CAAT----TGTTACTGTGACAGCCCAACACAGAGAAATGCTTGATCAAGT 146
BSNT_05437 147 ACTTGAAGC-TTTTGACTTAAAGCCTGATTTTGATTTGAATATCATGAAA 195
.|||||.|| ||||.|.|| |.|||.|||..||||||.||.|||||||||
BPUM_3218___m 147 TCTTGAGGCTTTTTCAATT-ACGCCAGATCATGATTTAAACATCATGAAA 195
BSNT_05437 196 GAAAGGCAAACGCTGGCTGAAATTACGTCTAATGCGCTTATGAAGCTAGA 245
.|..|.||.||..|..||||||||||.||.|||||.||..|.||||||||
BPUM_3218___m 196 CAGCGCCAGACATTATCTGAAATTACATCAAATGCACTGTTAAAGCTAGA 245
BSNT_05437 246 CGAGCTGTTTCAGTCCATC---------AAACCGGACATTGTGCTTGTTC 286
|||.|...|| |||||.||.|||||.||.||.|
BPUM_3218___m 246 ---------TCAATTATTCCAAGAAGAAAAACCTGATATTGTCCTGGTCC 286
BSNT_05437 287 ACGGCGATACGACAACGACATTTGCGGGTAGTCTT-GCTGCTTATTATCA 335
|.||.|||||.||||||||.|||||.||.|| ||| ||.||.|.||||||
BPUM_3218___m 287 ATGGGGATACAACAACGACCTTTGCAGGAAG-CTTGGCAGCATTTTATCA 335
BSNT_05437 336 CCAGATTTCCGTCGGCCATGTAGAGGCGGGACTTAGAACCGGGAACAAAT 385
|||.|||||.|||||.||.||.||.||.|||.|.|||||....||.||||
BPUM_3218___m 336 CCAAATTTCAGTCGGTCACGTCGAAGCAGGATTGAGAACACACAATAAAT 385
BSNT_05437 386 ACTCGCCGTTTCCTGAAGAGCTGAACAGGCTGCTGACGGGATCGATTGCC 435
|.||||||||.||.||.||..||||..|.|...||||.||..|.||||||
BPUM_3218___m 386 ATTCGCCGTTCCCAGAGGAATTGAATCGTCAAATGACAGGTACTATTGCC 435
BSNT_05437 436 GATTTTCATTTTGCGCCGACAGAGCAGGCCGAA-AAGAA---TTTACTCC 481
|||.|||||||..|.||.||||||.|.| |||| .|||| ||||.|
BPUM_3218___m 436 GATATTCATTTCTCTCCTACAGAGGAAG-CGAAGCAGAATCTTTTAAT-- 482
BSNT_05437 482 ACGAAAATAAAGATCCGGAGACGATTTTCGTCACCGGAAATACCGCAATT 531
.|||||||||.|....|||||.|||||.||.||.||.|||||.||||||
BPUM_3218___m 483 -TGAAAATAAAAAAGAAGAGACCATTTTTGTGACAGGTAATACAGCAATT 531
BSNT_05437 532 GATGCACTTCGCACAACAGTAAGGGACGGC--TAT--GCACATCCCGTCC 577
||.||.||.|..||||||||.|..|| || ||| |||| ||..|..
BPUM_3218___m 532 GACGCCCTGCAAACAACAGTTACTGA--GCATTATCAGCAC--CCTATTT 577
BSNT_05437 578 TTGAAAAAATCGGAAGTGACAAGATGATTTTACTTACCGCACATCGGCGT 627
|.||||.|||.||||..||.||.|||.|.||..|.||.||||||||..|.
BPUM_3218___m 578 TAGAAAGAATAGGAACGGATAAAATGGTCTTGTTAACGGCACATCGCAGA 627
BSNT_05437 628 GAAAATTTAGGGAAGCCGATGGAAAACATGTTTAAAGCGATCAGGCGAAT 677
||.|||.|.||..||||.|||.||||||||||||.|||.||.||.||..|
BPUM_3218___m 628 GAGAATCTCGGCCAGCCAATGAAAAACATGTTTAGAGCTATTAGACGTGT 677
BSNT_05437 678 CGTCGAAGAATTTGACGGCGTACAGGTCGTTTATCCCGTTCATCTCAATC 727
.||.|||||||||||.|..||.|||||.||||||||.||||||.|.||.|
BPUM_3218___m 678 TGTAGAAGAATTTGAAGATGTTCAGGTTGTTTATCCTGTTCATTTAAACC 727
BSNT_05437 728 CCGCTGTTCGTGAAGCGGCTGC--AAAGCACTT--CGGTGATTTGGATAA 773
|.||.||.|||||.|||||| | |.||.|.|| |||| .||.
BPUM_3218___m 728 CTGCCGTACGTGATGCGGCT-CAGACAGAATTTAGCGGT-------CTAG 769
BSNT_05437 774 A----GTCCATCTGTTAGAGCCGCTCGAAGTCATCGATTT-TACAACTTC 818
| ||.||..|..|.||.|||||.||||||.|.||||| .|.|||||.
BPUM_3218___m 770 ACCGTGTACACTTAATTGAACCGCTTGAAGTCGTTGATTTCCATAACTTT 819
BSNT_05437 819 GCTGCTGAAGCTCACTTCATCCTCACCGACTCGGGTGGGGTGCAGGAAGA 868
|||||.|...|.|||||.||..|.||.||.||.||.||.||.||.|||||
BPUM_3218___m 820 GCTGCCGCTTCACACTTTATTTTAACGGATTCTGGCGGTGTACAAGAAGA 869
BSNT_05437 869 AGCGCCGTCGCTTGGAAAGCCGGTCCTCGTGCTTCGCGATACTACGGAAC 918
.||.||.||.||.||.|||||.||..|.|||||.||.|||||.||.||||
BPUM_3218___m 870 GGCACCTTCTCTAGGGAAGCCAGTATTAGTGCTCCGTGATACAACAGAAC 919
BSNT_05437 919 GGCCAGAAGGCGTTCGGGCCGGTACGCTTAAACTGGCAGGAACGGATGAA 968
|.|||||||||||....||.||.||.|||||.||.|||||.|||||||||
BPUM_3218___m 920 GTCCAGAAGGCGTGAAAGCTGGGACACTTAAGCTTGCAGGTACGGATGAA 969
BSNT_05437 969 GATAAGATCTATCAACTGA------------------------------- 987
||.|..||.||..||.||.
BPUM_3218___m 970 GAGACCATTTACAAAATGGCAAAAGAGCTGCTAGTAGATCAGAAGGAATA 1019
BSNT_05437 987 -------------------------------------------------- 987
BPUM_3218___m 1020 TGACAGCATGTCGAAGGCGTCTAATCCTTATGGTGACGGACAAGCATCGA 1069
BSNT_05437 987 -------------------------------------------------- 987
BPUM_3218___m 1070 AACGAATTGTCCAAGAACTTCTTCATCGATTTGGATTAAGTGAAGAAAAA 1119
BSNT_05437 987 --------------------- 987
BPUM_3218___m 1120 CCTGTCCCATTCAAATCATAA 1140
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.