Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05421 and BPUM_3210
See
DNA alignment /
Visit
BSNT_05421 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence pep-align/BSNT_05421___tuaB.1.24716.seq
# -bsequence pep-align/BPUM_3210___tuaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05421___tuaB-BPUM_3210___tuaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05421___tuaB-BPUM_3210___tuaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05421___tuaB
# 2: BPUM_3210___tuaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 309/483 (64.0%)
# Similarity: 385/483 (79.7%)
# Gaps: 4/483 ( 0.8%)
# Score: 1602.0
#
#
#=======================================
BSNT_05421___ 1 MSTITKQILSGAKWTSVSTLIVTVIQIIQFALLGNIMTIAEFGLVGMLTT 50
|:::.|::|.||||||:|..|:|:|||.|||.|||:|::.|||||||:||
BPUM_3210___t 1 MASMKKRMLGGAKWTSLSAFIITIIQIAQFAFLGNVMSLKEFGLVGMITT 50
BSNT_05421___ 51 VTIFTQIVLDMGFGAALIQKENISERQLSTLYWLNILTGILLFIGLFCLS 100
|||||||:||:|.|||:||||..:|||||||||:|:|||::||..|..:|
BPUM_3210___t 51 VTIFTQILLDLGIGAAIIQKEQTTERQLSTLYWINLLTGVVLFCLLILVS 100
BSNT_05421___ 101 PFIADFYQRDELVFLVRILAGMFLIAPVGQQYQYMLQKELKFNVLSKIEA 150
|.||.||.|.||..|:::|:.||||||:|||||||:||:|.|..||.|||
BPUM_3210___t 101 PMIAAFYNRPELEGLLKLLSIMFLIAPIGQQYQYMMQKDLAFKTLSAIEA 150
BSNT_05421___ 151 GVTILSFVLLLVLVFLMDPIVAYAFSQVFLNSVKGILFFAVYFKKWRPSF 200
..|::|.::||.|.|.::|||||..|||.|.|.||:::.|.|:|||||:.
BPUM_3210___t 151 VATMISLIVLLALAFFINPIVAYVVSQVLLQSGKGLMYAAAYWKKWRPAP 200
BSNT_05421___ 201 VFALGEVKEFFSFGAFQLASRLVNRLGANIDMILIGRFLGAEALGIYNLA 250
|||||||||||||||||||||||||.|:|||||||||||||||||||:||
BPUM_3210___t 201 VFALGEVKEFFSFGAFQLASRLVNRAGSNIDMILIGRFLGAEALGIYSLA 250
BSNT_05421___ 251 YQIITIPVLKINPIVTRVAFPVFSKNKGDNRTLREGFLNMTKLLALISFP 300
|||:|||||||||||||||||||:|::.|:..||||||:||.:|||||||
BPUM_3210___t 251 YQIVTIPVLKINPIVTRVAFPVFAKSQRDHSMLREGFLSMTNMLALISFP 300
BSNT_05421___ 301 LLIGLMTVSDLFIEVAFGEKWLQAVPVLNILAIVGLLRVLMNPNGSVLLA 350
||:||:.|||.||||.||||||.||||||||.||||||||||||||:|||
BPUM_3210___t 301 LLVGLVAVSDSFIEVVFGEKWLVAVPVLNILCIVGLLRVLMNPNGSILLA 350
BSNT_05421___ 351 KGRADLAFYWDSGIMLLYGLSLYAAVLTNDLTTTAWTYAAISLINFFIGR 400
|||||||||||.|::|:||.:||..|.|..|.|.||.|:.:||:||.:||
BPUM_3210___t 351 KGRADLAFYWDMGMLLVYGTALYVGVSTGSLLTVAWVYSGVSLLNFIVGR 400
BSNT_05421___ 401 WLLKYVIQLKLGVYFRTVGKPLTLTLLMALLALVLSVGSRHLLHGAMLQL 450
||:.|||||.:.||.:::|||..:|||||..|:.|..|.:......:|||
BPUM_3210___t 401 WLMAYVIQLDMKVYLKSLGKPAVMTLLMAACAVALHQGMKLTSADILLQL 450
BSNT_05421___ 451 TVSVGISGIFYVFLVSKLYRRAMRAQLGR---- 479
.:::.:|...|..|:.|:|.:.....:.|
BPUM_3210___t 451 GLTICVSAALYGLLLIKMYPQVAGKLMRRGRSS 483
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.