Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05421 and BPUM_3210
See
Amino acid alignment /
Visit
BSNT_05421 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_05421___tuaB.1.24716.seq
# -bsequence dna-align/BPUM_3210___tuaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05421___tuaB-BPUM_3210___tuaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05421___tuaB-BPUM_3210___tuaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05421___tuaB
# 2: BPUM_3210___tuaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1576
# Identity: 975/1576 (61.9%)
# Similarity: 975/1576 (61.9%)
# Gaps: 260/1576 (16.5%)
# Score: 2773.0
#
#
#=======================================
BSNT_05421___ 1 ATGTCTACCATTACGAAACAAATATTAAGCGGTGCAAAATGGACAAGTGT 50
|||.|.|..||.|..||||.|||..||.||||.||.|||||||||||..|
BPUM_3210___t 1 ATGGCAAGTATGAAAAAACGAATGCTAGGCGGGGCGAAATGGACAAGCTT 50
BSNT_05421___ 51 TTCAACCTTGATCGTCACGGTTATTCAAATTATACAGTTTGCACTGCTCG 100
.||..|.||.|||.|.|||.|.||.|||||...||||||.||..|..|.|
BPUM_3210___t 51 GTCCGCATTCATCATTACGATCATCCAAATCGCACAGTTCGCCTTTTTAG 100
BSNT_05421___ 101 GCAATATCATGACAATTGCTGAA----TTCGGTTTGGTCGGGATGCTGAC 146
|.|||.|.|||.|| ||||| ||.||..|.||.||.|||.|.||
BPUM_3210___t 101 GGAATGTGATGTCA----CTGAAAGAGTTTGGACTCGTTGGTATGATCAC 146
BSNT_05421___ 147 CACTGTTACTATTTTCACACAAATTGTACTCGATAT-GGGATTTGGAGCC 195
.|||||.||.||.||.||.||.|||.||||.|||.| |||| |.||.||.
BPUM_3210___t 147 AACTGTCACAATATTTACGCAGATTTTACTTGATCTAGGGA-TCGGGGCA 195
BSNT_05421___ 196 GCTTTAATTCAAAAGGA--GAATATCAGTGAACGCCAATTATCTACTTTG 243
||..|.||.|||||.|| .||.|.|| |||||.|||||||||||.||.
BPUM_3210___t 196 GCGATCATCCAAAAAGAACAAACAACA--GAACGGCAATTATCTACATTA 243
BSNT_05421___ 244 TATTGGCTGAATATCTTAACAG-----GTATCCTTTTGTTTA-TCGGCCT 287
||||||.|.|||.|..|.||.| ||.|..||.|||||| ||...||
BPUM_3210___t 244 TATTGGATCAATTTACTCACTGGAGTTGTCTTATTCTGTTTACTCATTCT 293
BSNT_05421___ 288 -GTTTTGCCTGAGTCCCTTTATCGCAGACTTTTATCAGCGTGAC--GAAC 334
||| ||.||..|.||.||.|..||||||.|.| ||| ||.|
BPUM_3210___t 294 AGTT-------AGCCCAATGATTGCCGCTTTTTATAACC--GACCAGAGC 334
BSNT_05421___ 335 T-----GGTTTTTCTTGTGCGGA---TTTTGGCCGGCATGTTTTTAATCG 376
| ||| |||.|| |.||..|...|||||||.|.||.|
BPUM_3210___t 335 TGGAGGGGT--------TGCTGAAACTATTATCGATCATGTTTCTGATTG 376
BSNT_05421___ 377 CCCCGGTCGGGCAGCAGTATCAATATATGCTGCAAAAAGAACTGAAG--T 424
|.||..|.||.|||||.||.|||||.|||.|||||||.||.|| || |
BPUM_3210___t 377 CTCCTATTGGCCAGCAATACCAATACATGATGCAAAAGGACCT--AGCTT 424
BSNT_05421___ 425 TCAATGTGTTGAGCA--AA-----ATAGAAGCCGGGGTCACCATTTTGTC 467
|.|| |.|| || ||.|||||||..|..|||||..|.||
BPUM_3210___t 425 TTAA-------AACACTAAGTGCCATTGAAGCCGTTGCGACCATGATATC 467
BSNT_05421___ 468 ----ATT-TGTGCTCCTGCTCGTTTTGG--TTTTTCTGATGGATCCAATT 510
||| |.| |.||||..|||| ||.||| ||..||||.|||
BPUM_3210___t 468 GCTGATTGTTT-----TACTCGCATTGGCCTTCTTC--ATCAATCCGATT 510
BSNT_05421___ 511 GTGGCCTATGCATTTTCACAAGTTTTTCTTAATTCGGTTAAAGGCATCTT 560
||.|||||||...||||.|||||..|.||..|.||.|..|||||..|..|
BPUM_3210___t 511 GTAGCCTATGTCGTTTCTCAAGTGCTGCTGCAATCAGGAAAAGGGCTTAT 560
BSNT_05421___ 561 GTTTTTTGCTGTATATTTTAAAAAATGGCGTCCTTCTTTTGTCTTTGCAT 610
||.|...||.|..||||..||.||.|||||.||..|...|||.|||||||
BPUM_3210___t 561 GTATGCCGCAGCTTATTGGAAGAAGTGGCGCCCAGCACCTGTTTTTGCAT 610
BSNT_05421___ 611 TAGGGGAAGTGAAAGAATTTTTCTCTTTCGGCGCATTTCAGCTTGCTTCC 660
||||.|||||||||||.||||||||.|||||.||.||.|||||.||.|||
BPUM_3210___t 611 TAGGAGAAGTGAAAGAGTTTTTCTCATTCGGTGCTTTCCAGCTCGCATCC 660
BSNT_05421___ 661 AGGCTTGTAAACAGACTTGGCGCCAATATCGACATGATTTTGATCGGACG 710
||.||.||.||..||...||..|.|||||.|||||||||||.|||||.||
BPUM_3210___t 661 AGACTGGTCAATCGAGCAGGATCGAATATAGACATGATTTTAATCGGCCG 710
BSNT_05421___ 711 GTTTCTCGGTGCGGAAGCTTTGGGAATCTATAACCTAGCTTATCAGATTA 760
||||||.||.||.|||||.||.||.||.||||.|.|.||.|||||.|||.
BPUM_3210___t 711 GTTTCTTGGAGCAGAAGCGTTAGGTATTTATAGCTTGGCGTATCAAATTG 760
BSNT_05421___ 761 TTACGATTCCCGTGTTAAAAATCAACCCGATCGTGACACGGGTAGCGTTT 810
|.||||||||||||.|.||.|||||.|||||.|||||..|.||.||.||.
BPUM_3210___t 761 TGACGATTCCCGTGCTGAAGATCAATCCGATTGTGACGAGAGTGGCTTTC 810
BSNT_05421___ 811 CCTGTCTTCTCAAAAAATAAGGGAGATAACCGAACGCTGCGCGAAGGTTT 860
|||||.||..||||||...||.|.|||.||...|.||||||.||.||.||
BPUM_3210___t 811 CCTGTTTTTGCAAAAAGCCAGCGTGATCACTCCATGCTGCGAGAGGGCTT 860
BSNT_05421___ 861 TTTAAATATGACAAAGCTTCTCGCACTGATTTCATTCCCGCTTCTGATCG 910
..|.|.||||||.||..|.||||||.|||||...||.|||||..|..|||
BPUM_3210___t 861 CCTCAGTATGACGAATATGCTCGCATTGATTAGCTTTCCGCTATTAGTCG 910
BSNT_05421___ 911 GAC-TGATGACTGTTTCAGATTTATTTATTGAAGTCGCCTTCGGAGAAAA 959
|.| ||.|| ||||.||||||...|||||.|||||.|..||.|||||.||
BPUM_3210___t 911 GTCTTGTTG-CTGTATCAGATAGCTTTATAGAAGTAGTGTTTGGAGAGAA 959
BSNT_05421___ 960 ATGGCT-GCAGGCTGTACCAGTTCTGAACATCCTCGCG-ATTGTCGGACT 1007
|||||| |.| |||||.||.|||||.||.|| .|.|.| |||||.||.||
BPUM_3210___t 960 ATGGCTCGTA-GCTGTTCCGGTTCTTAATAT-ATTGTGCATTGTTGGCCT 1007
BSNT_05421___ 1008 CCTCAGGGTTCTGATGAATCCGAACGGATCGGTTTTGCTGGCGAAGGGGA 1057
.||..|.||.|||||||||||.|||||.||..|..|.||.||.|||||||
BPUM_3210___t 1008 TCTGCGTGTGCTGATGAATCCAAACGGGTCCATACTTCTTGCAAAGGGGA 1057
BSNT_05421___ 1058 GAGCAGACCTGGCATTTTATTGGGACAGCGGGATCATGCTCCTT---TAT 1104
||||.|||.|.||.|||||||||||.| .|||| |||||.||| |||
BPUM_3210___t 1058 GAGCGGACTTAGCCTTTTATTGGGATA-TGGGA--ATGCTTCTTGTGTAT 1104
BSNT_05421___ 1105 GG----------------GCTGTCACTTTATGC---GGCGGTACTAACGA 1135
|| |.||||| || |||.|| ||
BPUM_3210___t 1105 GGAACCGCCTTATATGTAGGTGTCA------GCACAGGCAGT-CT----- 1142
BSNT_05421___ 1136 ATGATTTGACGACCAC---CGCCTGGACATATGCAGCGATCAGCCTGATT 1182
|..||| .||.|||...||..|||...||||||||.|.
BPUM_3210___t 1143 ----------GCTCACAGTAGCTTGGGTTTACTCAGGTGTCAGCCTGCTC 1182
BSNT_05421___ 1183 AATTTCTTTATTGGCAGATGGCT----GCTCAAATATGTCATTCAGC--- 1225
||.|||.||.||||||||||||| ||| |||||||||||||
BPUM_3210___t 1183 AACTTCATTGTTGGCAGATGGCTCATGGCT----TATGTCATTCAGCTAG 1228
BSNT_05421___ 1226 ---TGAAGCTGGGCGTATATTT----TCGAACCGTTGGAAAACCGCTCAC 1268
||||| ||.||||| || || ||||.|||||
BPUM_3210___t 1229 ATATGAAG------GTGTATTTAAAATC--AC--TTGGCAAACC------ 1262
BSNT_05421___ 1269 CTTGACGCTGCTTATGGC---ATTGCTGG-CGCTTGTCTTGAGCGTTGGC 1314
.|||| |||||.| ||||.||| |||.||| |||.|.||
BPUM_3210___t 1263 -----TGCTG-TTATGACGCTATTGATGGCCGCCTGT-----GCGGTAGC 1301
BSNT_05421___ 1315 -----------------AGCAGACATCTGC------TTCACGGCGCCATG 1341
|||.||||||.|| || |.
BPUM_3210___t 1302 CCTGCATCAAGGGATGAAGCTGACATCAGCGGATATTT----------TA 1341
BSNT_05421___ 1342 CTTCA------GCTGAC----AGTTTCAGTCGGGATAAGCGGGATTTTTT 1381
||||| .||||| .||.||||| ||.|.| ||.|
BPUM_3210___t 1342 CTTCAATTAGGACTGACGATTTGTGTCAGT--------GCTGCA--TTGT 1381
BSNT_05421___ 1382 ACGTTTTTTTGGTCAGCAAATTATATCGGCGGGCTATG--AGGGCCCAAT 1429
|||..||..||.|||.||||.|.||||.||.|| || ||| |.|||
BPUM_3210___t 1382 ACGGCTTGCTGCTCATCAAAATGTATCCGCAGG---TGGCAGG--CAAAT 1426
BSNT_05421___ 1430 TA---GGAAG------------ATGA 1440
|| .|||| ||||
BPUM_3210___t 1427 TAATGAGAAGAGGTCGTTCGTCATGA 1452
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.