Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05420 and BPUM_3209
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence pep-align/BSNT_05420___tuaC.1.24716.seq
# -bsequence pep-align/BPUM_3209___tuaC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05420___tuaC-BPUM_3209___tuaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05420___tuaC-BPUM_3209___tuaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05420___tuaC
# 2: BPUM_3209___tuaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 223/395 (56.5%)
# Similarity: 282/395 (71.4%)
# Gaps: 5/395 ( 1.3%)
# Score: 1167.0
#
#
#=======================================
BSNT_05420___ 1 MKVLWITSVYPSSQKPGEGVFHETQVQALYMQGVDVTVICPLPVNPAPLR 50
|||||:||||||.:.|.||||||||||.|..||:.||||||.||||..||
BPUM_3209___t 1 MKVLWLTSVYPSEKHPSEGVFHETQVQELLKQGIQVTVICPNPVNPPILR 50
BSNT_05420___ 51 LLKKKYRQTRTVPEYEERKGIPVYRPPYTALPGQLKWAQPHRRIAKSVLR 100
:||..|||.:.:||.|.|.|:.||||||||||||||||||.:|||.|||.
BPUM_3209___t 51 MLKASYRQKKDLPEQEMRNGVTVYRPPYTALPGQLKWAQPSKRIAASVLG 100
BSNT_05420___ 101 TIEKYSLAPNLIHAHFAMPSGGAAAVIAQRLKVPYVLTLHGSDVNIYPHY 150
.:::|.|:|:.||||||||||||||||.|:.|:||:|||||||||:||.|
BPUM_3209___t 101 AMQRYQLSPDFIHAHFAMPSGGAAAVIQQKTKIPYLLTLHGSDVNVYPSY 150
BSNT_05420___ 151 SKGAFRAFDMAVHAAAKVLAVSDALKAKTKEMTGADCSVLPIGVNLDNFQ 200
||||:.||:.||..|:.||.||:.|..||.:||..:...||:|:.|.:|.
BPUM_3209___t 151 SKGAYAAFETAVKQASAVLTVSEELAKKTNDMTKVEAQCLPLGIPLQSFS 200
BSNT_05420___ 201 KNSASTLELREKLGLPTDKKLLTFVGRLVKGKGVAELAEAVRSLDDSYRA 250
|.......:|||||||...||:.|||||||.||:.||.||:..: |..:|
BPUM_3209___t 201 KTEEDQQVIREKLGLPLHDKLVVFVGRLVKEKGLLELVEAISGM-DGVKA 249
BSNT_05420___ 251 VFIGDGPEKQHIRQIAGEKAILMGQVSNLQISEYLAASDLFVLPSYSEGM 300
||:|.||..:.:.:.||...||.|||.|.|:.:||.|:|||.||||||||
BPUM_3209___t 250 VFVGKGPLAKELTERAGASIILPGQVPNDQVKDYLMATDLFTLPSYSEGM 299
BSNT_05420___ 301 PTVVIEALALKVPVLCTAVGGVPSLFGKHEHLLIKPRSASSITEAVKGYL 350
||||:|||||||||:.|.|||:|:||..::|||:.|.||:.:.||:..||
BPUM_3209___t 300 PTVVLEALALKVPVIATRVGGLPTLFSSYQHLLVDPHSANQLKEAIHAYL 349
BSNT_05420___ 351 EVGTWQEVIAEELYQTVLDDYDAFQNAGKLLDVYKDVVKNN---- 391
....|.|.:..:|:|.|..:|.:..||.:|:..|:.|:..:
BPUM_3209___t 350 YENRWNEQVKSDLHQIVHTEYSSENNAKQLIQQYEKVLHQSRSIV 394
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