Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05415 and BPUM_3206
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence pep-align/BSNT_05415___tuaE.1.24716.seq
# -bsequence pep-align/BPUM_3206.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05415___tuaE-BPUM_3206.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05415___tuaE-BPUM_3206.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05415___tuaE
# 2: BPUM_3206
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity: 277/492 (56.3%)
# Similarity: 363/492 (73.8%)
# Gaps: 15/492 ( 3.0%)
# Score: 1472.0
#
#
#=======================================
BSNT_05415___ 1 MSLKRSAVNVLVWLAALTAGLACIVLAQS---NAKKILLACLIMIALTSI 47
||:|::|..:::......||:..:.:..: ..||::...:|::.|.:.
BPUM_3206 1 MSVKQTAWQIMIGCILFAAGIGLVQMTSTQPVGLKKMVAVPVILLILAAA 50
BSNT_05415___ 48 VVLRK-YMSSEQLLMPVLYLLIAATFANNAFFTIKLGFFSLFPYRILLIL 96
:||.| ||:.||:.|..:|||...||.|||||:|..||||||.|||:||.
BPUM_3206 51 LVLMKLYMNGEQIFMSAIYLLTTLTFLNNAFFSISAGFFSLFLYRIMLIA 100
BSNT_05415___ 97 AGFIFIAEMLKGSRHLEKWNQVRVKGILMFFAFWFCYGMISLLWVKSVTD 146
|..:||..|.:...::.:|.|:||||||.||:.||.||:|||||..||||
BPUM_3206 101 AFALFIWRMREKGTYISQWQQIRVKGILGFFSAWFLYGLISLLWAHSVTD 150
BSNT_05415___ 147 GIKYMFLLAMGMFFVFLIVMFFQKLDRIFAFYYIWLVMTVFVMGIGFYNH 196
|:|||.||||||.||||:||:.|::|::..||.|||||||||||||||||
BPUM_3206 151 GLKYMSLLAMGMGFVFLVVMYIQRMDQVVTFYSIWLVMTVFVMGIGFYNH 200
BSNT_05415___ 197 FTFNHLPSSTLYNGPHYKQHYPTSVFFNQNDFATFLSISFCFYLSFFKNI 246
||.||||:::||.||.||||||||||||||||||||||||..||:..:.:
BPUM_3206 201 FTLNHLPNTSLYLGPAYKQHYPTSVFFNQNDFATFLSISFFLYLACMRQM 250
BSNT_05415___ 247 KNSYLKIAGLILAFCSAYLIFLTGSRASILGVIAGLAVYTFILLPKMLKK 296
||.|:|..||:.|..:.|||.||.||||:||:.||:|:|.::|||::|||
BPUM_3206 251 KNGYIKAFGLLGAIAALYLILLTESRASLLGIFAGVAIYVWLLLPRVLKK 300
BSNT_05415___ 297 WALIAAAAGCIAFVTLFAGKITGAFYTYFLAPQTIHDFSEPLPSNVGRAN 346
|::|||:...:..:.:|:.||...||..|||.|..|.||||||||:.|||
BPUM_3206 301 WSIIAASGLVVIGIAVFSAKIYSTFYDLFLASQIAHSFSEPLPSNIARAN 350
BSNT_05415___ 347 LLKNAGHYVLDTYGFGVGAGNVPYYLEHHALFDTDQVVEVHNWLVEIMTN 396
|:|||.|:..::||||||||||.|||.|.::|||||||||||||:|:|||
BPUM_3206 351 LMKNAWHFFTNSYGFGVGAGNVSYYLAHFSIFDTDQVVEVHNWLLELMTN 400
BSNT_05415___ 397 FGVVMMLGYLTMYIYLITVLYRYYKRSLGRRPKLLIEGLTAALVAFLVSS 446
||..:||||:::|.||:..||:.||.:..|..|::||||.||:::|||||
BPUM_3206 401 FGFAVMLGYISLYAYLMFTLYKQYKWADTRSAKMIIEGLFAAMLSFLVSS 450
BSNT_05415___ 447 ISPSSVSNLYFHWVFLALVIAAINTFRISGTDETEQYR---- 484
|||||:||||||||||.|||||:|..: .:.|
BPUM_3206 451 ISPSSISNLYFHWVFLGLVIAAVNMLK-------NKQRLKLW 485
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