Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05397 and BPUM_3201

See DNA alignment / Visit BSNT_05397 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05397___yvhJ.1.24716.seq
#    -bsequence pep-align/BPUM_3201.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05397___yvhJ-BPUM_3201.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05397___yvhJ-BPUM_3201.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05397___yvhJ
# 2: BPUM_3201
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity:     223/364 (61.3%)
# Similarity:   269/364 (73.9%)
# Gaps:          35/364 ( 9.6%)
# Score: 1155.5
# 
#
#=======================================

BSNT_05397___      1 MPERVKVRVKKKKNKRKIILKRILLLFFLFSIVFAGIIGYKVYKTLQAAD     50
                     |.:||||||:|||:|:|.|.||||:||.|..|...|...||:..||||||
BPUM_3201          1 MAQRVKVRVRKKKSKKKKIFKRILVLFLLLFICMGGFAVYKIVNTLQAAD     50

BSNT_05397___     51 SSYKELDRGEKSKLRKEVVDLKKKQPFSVLLLGVEDYATGGKGGRTDSII    100
                     .:|.|||||||||||..|:|:||| |||||.:|:|||||.|..||:||:|
BPUM_3201         51 KTYDELDRGEKSKLRDAVIDIKKK-PFSVLFVGIEDYATDGDHGRSDSLI     99

BSNT_05397___    101 VATINPKQKTMKLLSIPRDTRVEISGDTSGTKTRINSAYGKGGAQTTVET    150
                     ||||||:.||||::||||||||:::.||:|.|.:||:|:.|||...|:||
BPUM_3201        100 VATINPQDKTMKMVSIPRDTRVQLASDTTGNKVKINAAFAKGGKDETIET    149

BSNT_05397___    151 VEKLLNIPIDYYATVDFKGFKKTIDEVGGVDVEVPFDFNEKSDTSKSKKF    200
                     ||:.||||||.||||||.|||..||||.|:|::||||||||||..||||.
BPUM_3201        150 VEQFLNIPIDKYATVDFDGFKDVIDEVDGIDIDVPFDFNEKSDVKKSKKI    199

BSNT_05397___    201 YFQKGNMHLNGEEALAYARMRKQDPRGDFGRNDRQKQILMAMLDQVSKPS    250
                     ||:||||||||||||||||||||||||||||||||||||.||:||:||.:
BPUM_3201        200 YFKKGNMHLNGEEALAYARMRKQDPRGDFGRNDRQKQILRAMIDQMSKAN    249

BSNT_05397___    251 NLAKIDTLADQVSDNITTNLRITQVLALQQIFSGFKGNDVETLTLKGSDL    300
                     |:|.:|.:|.:|||:||||.|||:.||||||:|||||:|.|||::|||||
BPUM_3201        250 NIANVDNIAKEVSDHITTNFRITEGLALQQIYSGFKGDDTETLSIKGSDL    299

BSNT_05397___    301 YIG--NKYFFQPDDEELTKVQEELYNFL-YPDK-----------------    330
                     |:|  ..|:|:||...|..||.||...| .|.:                 
BPUM_3201        300 YLGPNRTYYFEPDQTNLANVQNELRTHLKLPTESSTETDSQTNPSSGETG    349

BSNT_05397___    330 --------------    330
                                   
BPUM_3201        350 SSDITNPSTNTSGQ    363


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