Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05392 and BPUM_3196
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence pep-align/BSNT_05392___comFA.1.24716.seq
# -bsequence pep-align/BPUM_3196___comFA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05392___comFA-BPUM_3196___comFA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05392___comFA-BPUM_3196___comFA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05392___comFA
# 2: BPUM_3196___comFA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 245/468 (52.4%)
# Similarity: 313/468 (66.9%)
# Gaps: 14/468 ( 3.0%)
# Score: 1231.0
#
#
#=======================================
BSNT_05392___ 1 MNVPVEKNSSFSRELQQTLRSRHLLRTELSFSDEMIEWHIKNGYITAENS 50
.|...:.:|.:.|:|||||..|.......::|..:.|.:....:
BPUM_3196___c 1 ------MNMDKAMKLGEQLQSRHLLTAETRCLQSELDWLEEKGLVIRRTA 44
BSNT_05392___ 51 ISINKRGYRCNRCGQTDQRYYSFYHS----SGKNKLYCRSCVMMGRVSEE 96
|.....|..|.|||.:..:| |.|| ..|:.:|||||:|||:.||.
BPUM_3196___c 45 IERKANGLICCRCGVSKNQY--FAHSPCDKCQKDCVYCRSCIMMGKTSEC 92
BSNT_05392___ 97 VPLYSWEEENEPNWQSIKLTWDGKLSSGQQKAANVLIEAISKKEELLIWA 146
..||.|...........:|||.|.||.||::|:..|||||..|.:|||||
BPUM_3196___c 93 EFLYEWTGPPIEGTAHTELTWRGNLSKGQKRASEKLIEAIKHKSDLLIWA 142
BSNT_05392___ 147 VCGAGKTEMLFPGIESALNQGLRVCIATPRTDVVLELAPRLKAAFQGADI 196
||||||||:||.|||.||:||:|||||||||||||||.||||.||.|..|
BPUM_3196___c 143 VCGAGKTEVLFHGIEYALHQGMRVCIATPRTDVVLELEPRLKKAFHGLKI 192
BSNT_05392___ 197 SALYGGSDDKGRLSPLMISTTHQLLRYKDAIDVMIIDEVDAFPYSADQTL 246
:||||||..:.:::||:|:|||||:|||.|.||::||||||||||.|:.|
BPUM_3196___c 193 AALYGGSLQRFQIAPLVIATTHQLMRYKHAFDVLVIDEVDAFPYSMDERL 242
BSNT_05392___ 247 QFAVQKARKKNSTLVYLSATPPKELKRKALNGQLHSVRIPARHHRKPLPE 296
.|||.||.:|....|||||||.|::.|....|||.:::||.|.|::.||.
BPUM_3196___c 243 HFAVLKAMRKKGVRVYLSATPSKKMIRDVSRGQLEAIKIPLRFHQQLLPV 292
BSNT_05392___ 297 PRFVWCGNWKKKLNRNKIPPAVKRWIEFHVKEGRPVFLFVPSVSILEKAA 346
|.|.|.|:|||||.:|::||.|..|::.|:.:.|.|.|||||:|.::|..
BPUM_3196___c 293 PSFQWIGHWKKKLKKNQLPPIVMNWMQNHIAKKRRVLLFVPSISTMKKVT 342
BSNT_05392___ 347 ACFRGVHCRTASVHAEDKHRKEKVQQFRDGQLDLLITTTILERGVTVPKV 396
...|..|.....|.|:|..||:|||||||.:.|:|:||||||||||:|.|
BPUM_3196___c 343 KVLRKHHLNVEGVSADDPDRKQKVQQFRDDKYDVLVTTTILERGVTIPNV 392
BSNT_05392___ 397 QTGVLGAESPIFTESALVQIAGRTGRHKEYADGDVIFFHFGKTKSMLDAR 446
|.|||||||.||||||||||:||.|||.::..|||.|||||.|:||..|:
BPUM_3196___c 393 QVGVLGAESTIFTESALVQISGRAGRHPDFFKGDVFFFHFGLTRSMKQAK 442
BSNT_05392___ 447 KHIKEMNELAAKVECTD- 463
.||.:||:.|.| |.::
BPUM_3196___c 443 NHIVKMNDTAEK-EFSEK 459
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