Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05388 and BPUM_3193

See DNA alignment / Visit BSNT_05388 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05388___yvyF.1.24716.seq
#    -bsequence pep-align/BPUM_3193.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05388___yvyF-BPUM_3193.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05388___yvyF-BPUM_3193.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05388___yvyF
# 2: BPUM_3193
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:      83/139 (59.7%)
# Similarity:   104/139 (74.8%)
# Gaps:           0/139 ( 0.0%)
# Score: 465.0
# 
#
#=======================================

BSNT_05388___      1 MGELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQST     50
                     |.:|||||:||.|||||.:||||..|.:|||:||:.||||||||.|||||
BPUM_3193          1 MNQLANCPQCNQLFLKTTIQTVCNKCFEEEERSFDIVYKFLRKQSNRQST     50

BSNT_05388___     51 LSRITEETGVEEELILKFIRQKRIQITHLPNLAYPCEKCGTSIREGKFCK    100
                     ::.|.:.|.|:|||||||||.||:||:..||:.||||:||..||:.|.|.
BPUM_3193         51 IAEIVDATEVDEELILKFIRLKRLQISQFPNINYPCERCGQPIRKNKLCS    100

BSNT_05388___    101 DCQSDIKDQMDHLNHEDALKIEKENSKKDTYYAYNTKNS    139
                     .|:.||:.|:..:|.|:..|.|.|:.|||||||.|.||.
BPUM_3193        101 QCEQDIQSQISQMNQEEERKREIESRKKDTYYAINPKND    139


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