Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05388 and BPUM_3193
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_05388___yvyF.1.24716.seq
# -bsequence dna-align/BPUM_3193.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05388___yvyF-BPUM_3193.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05388___yvyF-BPUM_3193.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05388___yvyF
# 2: BPUM_3193
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 284/450 (63.1%)
# Similarity: 284/450 (63.1%)
# Gaps: 60/450 (13.3%)
# Score: 795.0
#
#
#=======================================
BSNT_05388___ 1 ATGGGAGAACTGGCTAATTGTCCGAAATGCAAT--GCTTTATTTTTAAAA 48
|||....||.||||.||.||.||..||||.||| || |.|||||||||
BPUM_3193 1 ATGAATCAATTGGCAAACTGCCCACAATGTAATCAGC--TGTTTTTAAAA 48
BSNT_05388___ 49 ACAAAGCTGCAAACTGTATGT----CAGGCGTGTATTAAGGAAGAAGAAA 94
||.|...|.|||||.||.||| .|.||.| .|||||||||.
BPUM_3193 49 ACGACCATCCAAACGGTTTGTAACAAATGCTT-------CGAAGAAGAAG 91
BSNT_05388___ 95 AA---TCATTTGAGACTGTCTATAAATTTTTAAGAAAACAGGAA--AACC 139
|| ||.|||||.|..||.|||||||||||..||||.|| || ||..
BPUM_3193 92 AACGTTCTTTTGATATCGTTTATAAATTTTTGCGAAAGCA--AAGTAATA 139
BSNT_05388___ 140 GGCAATCAACT-TTGAGCCGG--ATAACTGAGGAAACAGGTGTGGAAGAA 186
|.||||||||| ||| |.| |||...||.|.|||||..||.||.|||
BPUM_3193 140 GACAATCAACTATTG---CTGAAATAGTAGATGCAACAGAAGTTGATGAA 186
BSNT_05388___ 187 GAGCTGATATTGAAATTCATCAGGCAGAAGCGAATTCAGATCACTCATCT 236
||..|.||.||||||||.|||.|...|||..||.||||.||.|..||..|
BPUM_3193 187 GAATTAATCTTGAAATTTATCCGCTTGAAAAGACTTCAAATTAGCCAATT 236
BSNT_05388___ 237 TCCTAATTTGGCA--TACCCTTGTGAAAAGTGCGGGACATCGATTAGAGA 284
|||.|||.| || ||.||||||||||..||.||...|.||||.||..|
BPUM_3193 237 TCCGAATAT--CAACTATCCTTGTGAAAGATGTGGCCAACCGATCAGGAA 284
BSNT_05388___ 285 AGGCAAGTTCTGCA------------AGG--ATTGCCAGTCCGATATTAA 320
|..||||.|.|||| ||| ||| |||| ||..|.|||
BPUM_3193 285 AAACAAGCTGTGCAGCCAATGTGAACAGGACATT--CAGT-CGCAAATAA 331
BSNT_05388___ 321 GGATCAAATGGATCATTTGAACCACGAGGATGCTCTGAAAATCGAGAAAG 370
| ||||| |||||||.||.||.|..|..||||..||||..|
BPUM_3193 332 G--TCAAA---------TGAACCAAGAAGAAGAGCGTAAAAGGGAGATTG 370
BSNT_05388___ 371 AAAATAGTAAAAAAGACACATACTATGCCTATAATACCAAAAACAGCTGA 420
||..|||.|||||||||||.||.||||||..||||.|.||||||...|||
BPUM_3193 371 AATCTAGGAAAAAAGACACCTATTATGCCATTAATCCTAAAAACGATTGA 420
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