Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05387 and BPUM_3192

See DNA alignment / Visit BSNT_05387 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05387___flgM.1.24716.seq
#    -bsequence pep-align/BPUM_3192___flgM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05387___flgM-BPUM_3192___flgM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05387___flgM-BPUM_3192___flgM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05387___flgM
# 2: BPUM_3192___flgM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      45/88 (51.1%)
# Similarity:    62/88 (70.5%)
# Gaps:           1/88 ( 1.1%)
# Score: 229.0
# 
#
#=======================================

BSNT_05387___      1 MKINQFGTQSVNPYQKNYDKQAVQKTAAQPQDKIEISSQAKEMQHASDAV     50
                     ||||::|||.||||:|.|:||.:|...|:..||:|||.:|.|||...: :
BPUM_3192___f      1 MKINRYGTQPVNPYKKTYEKQTLQSNQAKSTDKVEISKKAIEMQKVPN-I     49

BSNT_05387___     51 TGSRQEKIAQLKAQIENGSYKVDANHIAKNIINFYKKQ     88
                     ...||:||.|:|..||.|:|:||...||..::||||:|
BPUM_3192___f     50 MKERQDKIDQIKKSIEAGTYQVDTKGIADKMLNFYKQQ     87


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