Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05377 and BPUM_3184

See DNA alignment / Visit BSNT_05377 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_05377___fliD.1.24716.seq
#    -bsequence pep-align/BPUM_3184___fliD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05377___fliD-BPUM_3184___fliD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05377___fliD-BPUM_3184___fliD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05377___fliD
# 2: BPUM_3184___fliD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 509
# Identity:     255/509 (50.1%)
# Similarity:   360/509 (70.7%)
# Gaps:          16/509 ( 3.1%)
# Score: 1283.5
# 
#
#=======================================

BSNT_05377___      1 MVTRITGLASGMDIDDIVSKLMQTERAPLDKLKQKKQTLEWQRDSYREVN     50
                     ||.||||.::..|||:||||||:||:|||||:.::||||||||||||||.
BPUM_3184___f      1 MVNRITGFSNVFDIDEIVSKLMKTEQAPLDKMTRQKQTLEWQRDSYREVT     50

BSNT_05377___     51 TKIKELQDYMSKNTLTYPSTYQSKTVTSSNESVLTATGSASAPNSSSTVE    100
                     :|:|||.|.:.|..|..||||.:|.|||||||.:|||||.:|  :|.::.
BPUM_3184___f     51 SKVKELDDLIYKLELGRPSTYGAKKVTSSNESAVTATGSTNA--ASGSIN     98

BSNT_05377___    101 VASLATAATYKANNYTGYTQGDYNLAFNVVAPGETTAKTVNISVTSADTI    150
                     |..||||:.:|::..:|:|..:....|.|..|..|..|||.|:....|||
BPUM_3184___f     99 VTQLATASVFKSSGTSGFTPANGTFTFEVTTPDSTKPKTVTINTADTDTI    148

BSNT_05377___    151 DNVISKLNSSDLGVSAFKDKIWNGTEYVETIAFSSKATGAGGSIQAADSA    200
                     |:::.|||:|.|||:|:|.:|::|:.||:|:|.:|:.||.|.||:|.|..
BPUM_3184___f    149 DDIVKKLNNSQLGVTAYKGQIFDGSNYVDTVALTSRTTGEGVSIKATDGN    198

BSNT_05377___    201 TADFMSGQLGFSLDADNKLTAYKEGTNAKVTINGFEMEKLTNNFTVNGVT    250
                     :|.|.: ||||.:|.||||.|..:|..|:..|||.:||...|.|...|:|
BPUM_3184___f    199 SASFFT-QLGFQVDGDNKLVATTQGQKAQYEINGLKMENNNNTFEQAGIT    247

BSNT_05377___    251 YSIKNTTAATGPVTTSVSTDVDGIYNQIKEFVDKYNEMVDSLNEKLKEEK    300
                     |.:|.||  ..||:.:||||||.|:::||:|||||||:|:.:|.|:.|::
BPUM_3184___f    248 YELKGTT--DKPVSLNVSTDVDTIFDKIKQFVDKYNELVEQVNGKVNEKR    295

BSNT_05377___    301 YRDYTPLTSEQKEAMSDKEVELWEEKAKSGLLRNDSSISTGTNQMRTDFY    350
                     .|||.|||:|:|:|||||||||||..|||||||:||.:..|.:::|:|||
BPUM_3184___f    296 NRDYHPLTAEEKKAMSDKEVELWETTAKSGLLRSDSILRGGASKIRSDFY    345

BSNT_05377___    351 TQV-NADGKTYQLTEFGITTSSAYQMRGHLEINEDKLKAKIQEDPQSVAA    399
                     .:: .:|.....:|:.|||||:.|:..|.|||:|:||:..|:.|||:|:.
BPUM_3184___f    346 AEITTSDANKIHITQIGITTSNKYKDGGKLEIDEEKLRKAIEADPQNVSQ    395

BSNT_05377___    400 LFTSG----------SNSSAYSDKGIMKRIGDTLKSTVKSIEAKAGNSTM    439
                     :|.||          .....|:::||:.|:.::|.:..|||:.|||::||
BPUM_3184___f    396 MFISGKLNVDSKDKDKAQQQYNEQGIIYRVQNSLTAFTKSIQKKAGSTTM    445

BSNT_05377___    440 GTNDYSIGKNLNTISTDITKMQDRLTTIENRYYSKFSAMDSAIQKMNEQA    489
                     ...:|.:||:|::::..:...||||..:|.|||.|||||||||||:|.|:
BPUM_3184___f    446 QLKEYVLGKDLDSLTKRMDTFQDRLKMVETRYYKKFSAMDSAIQKLNNQS    495

BSNT_05377___    490 SYLSQLLVQ    498
                     .||||||.|
BPUM_3184___f    496 GYLSQLLGQ    504


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