Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05373 and BPUM_3181

See DNA alignment / Visit BSNT_05373 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_05373.1.24716.seq
#    -bsequence pep-align/BPUM_3181.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05373-BPUM_3181.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05373-BPUM_3181.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05373
# 2: BPUM_3181
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      65/127 (51.2%)
# Similarity:    88/127 (69.3%)
# Gaps:           3/127 ( 2.4%)
# Score: 336.0
# 
#
#=======================================

BSNT_05373         1 --MKSIEDYTLLSAYYHLLFTIEEGLCYLIEAEENLSKTEGDRIYQDLIQ     48
                       .:| :||.||:.||.|||||||.|.||.|.|::.:|||||||:.|||.
BPUM_3181          1 MAYRS-DDYILLTTYYELLFTIEESLKYLDEIEKDFAKTEGDRIFNDLIH     49

BSNT_05373        49 AFFYLDSTHSTLLFIMDSRCAEICVKAFDQIFAEFDQLVSFSFPSHEFCE     98
                     |||:||:||..||.|:::......:::|||||..||.|..::|||..|..
BPUM_3181         50 AFFHLDTTHPLLLSIIENEHFAKTIRSFDQIFLSFDILAFYTFPSIHFQS     99

BSNT_05373        99 YLKEHFLIHYRKWMLSIHQCMEPFLIN    125
                     :||.:|:..|||||..||.||.|::|:
BPUM_3181        100 FLKSYFIPEYRKWMDEIHACMRPYVIH    126


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.