Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05372 and BPUM_3179
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence pep-align/BSNT_05372___yvyD.1.24716.seq
# -bsequence pep-align/BPUM_3179___raiA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05372___yvyD-BPUM_3179___raiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05372___yvyD-BPUM_3179___raiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05372___yvyD
# 2: BPUM_3179___raiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 157/189 (83.1%)
# Similarity: 173/189 (91.5%)
# Gaps: 2/189 ( 1.1%)
# Score: 811.0
#
#
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BSNT_05372___ 1 MNYNIRGENIEVTPALKDHVERKIGKLERYFDHSVDADVNVNLKFYNDKE 50
||||:|||||:|||||:||||:|||||||||:..|||.||||||||||:|
BPUM_3179___r 1 MNYNVRGENIDVTPALRDHVEKKIGKLERYFETDVDASVNVNLKFYNDQE 50
BSNT_05372___ 51 SKVEVTIPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFR 100
|||||||||||||||:||||||||||:|||.:||||||||||||||||||
BPUM_3179___r 51 SKVEVTIPMTDLALRAEVHNEDMYNAVDLAASKLERQIRKHKTKVNRKFR 100
BSNT_05372___ 101 EQGSPKYLLANGLGSDTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAI 150
|||:.|:|.|.|.|: .|:||||| ||.:..:||||||||||||||||||
BPUM_3179___r 101 EQGAKKHLFAGGNGT-ADVAVQDD-EEIDETEIVRQKRFNLKPMDSEEAI 148
BSNT_05372___ 151 LQMNMLGHNFFVFTNAETNLTNVVYRRNDGKYGLIEPTE 189
||||||||:||||||||||||||||||||||||||||..
BPUM_3179___r 149 LQMNMLGHSFFVFTNAETNLTNVVYRRNDGKYGLIEPNA 187
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