Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04889 and BPUM_3176
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence pep-align/BSNT_04889.1.24716.seq
# -bsequence pep-align/BPUM_3176___yusX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04889-BPUM_3176___yusX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04889-BPUM_3176___yusX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04889
# 2: BPUM_3176___yusX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 598
# Identity: 367/598 (61.4%)
# Similarity: 455/598 (76.1%)
# Gaps: 1/598 ( 0.2%)
# Score: 1945.0
#
#
#=======================================
BSNT_04889 1 MALQGVGQRWDLDSFFKGGSQSEEFKGYIEKLSQSLRAFQDRTDAFQVPE 50
|.|..:.:.||||:||||||.|..||.|::.:.|.|...:.:.|||...:
BPUM_3176___y 1 MGLTTLQETWDLDAFFKGGSSSPAFKTYLQHIEQLLDELRQKVDAFSKED 50
BSNT_04889 51 SPEEAEGLTALLDLFEQTSVKLQQAGAFVACLQAQNINDQKAIEHQALMN 100
:..|.: ||:::|.:|.|..||.|||:||:|||:||..|.||...:..:.
BPUM_3176___y 51 THIENK-LTSVIDTYETTYKKLSQAGSFVSCLQSQNTKDMKAGSLRGTIA 99
BSNT_04889 101 RLSADFQSSLVTLDHKLVDVDQDVWNELLTKPGLRDISYILNERRQRVAE 150
:|.||..:.|...|..|..:....|.:|:......|:.|||||||.||.:
BPUM_3176___y 100 KLEADLGTILALFDQALAAISPSKWEDLMNSEAFSDVRYILNERRDRVKD 149
BSNT_04889 151 KLSPGKEKLIGNLAVDGYHAWSDLYNMVVGKMTIPYGENGENKQLSVGQA 200
:|...:|.||..|||||||||.|.|:.:|.|:|||:.::||.:.:|||||
BPUM_3176___y 150 QLPVEQETLIQKLAVDGYHAWDDFYSSLVNKITIPFEQHGETQMISVGQA 199
BSNT_04889 201 ENMMDHQDRTVRKTVYERFRQAWESKQDIFSNTLNHLAGFRLETYKARGW 250
||.||..||.|||.||.....||...:.:|::||||||||||:.|:||||
BPUM_3176___y 200 ENAMDDSDREVRKAVYHNLEHAWTQDEHLFASTLNHLAGFRLQVYEARGW 249
BSNT_04889 251 ENVLKEPLQINRMKKETLDTMWQVITENKKPFVQFLNRKASMLGLEKLSW 300
:::|||||.|.|||:||||.||.||.|:|:||:.:|:|||.|||::||||
BPUM_3176___y 250 DHILKEPLDICRMKQETLDAMWSVIDEHKQPFIDYLHRKADMLGVDKLSW 299
BSNT_04889 301 YDVEAPIGSDGKVYSYDEAANIITSQFSTFGKKLSSFTEKAFRDGWIEAE 350
:||.|||||:.|:|.|.|||..|...|:.||.:|::||||||.:.|:|||
BPUM_3176___y 300 FDVGAPIGSETKIYPYQEAAAFIVKHFAGFGAELAAFTEKAFNERWVEAE 349
BSNT_04889 351 DRSGKRVGGFCTSFPDSGESRIFMTFSGSASNVSTLAHELGHAFHQEAML 400
||..||||||||:||||||||||||||||.|||:||||||||:||||.|.
BPUM_3176___y 350 DRPNKRVGGFCTNFPDSGESRIFMTFSGSPSNVATLAHELGHSFHQEVMQ 399
BSNT_04889 401 DVRPLNRSYAMNVAETASTFAEMIVADATVQQAETREEKLVLLEDKVQRS 450
|||.|||.||||||||||||||||||||::::|...||:|.|||||:|||
BPUM_3176___y 400 DVRILNRKYAMNVAETASTFAEMIVADASLKEAANEEERLSLLEDKLQRS 449
BSNT_04889 451 VAFFMNIHARFLFETRFYEERKRGVVPASRLNELMEEAQREAYCNALEEY 500
|||||||.:|||||.|||||||:|.|||.||||||..||:||:.::|:||
BPUM_3176___y 450 VAFFMNIQSRFLFEQRFYEERKQGEVPADRLNELMVAAQKEAFGDSLDEY 499
BSNT_04889 501 HPLFWASKLHFHITRVPFYNFPYTFGYLFSLGIYALALEEKNAFEEKYMA 550
||.|||||||||||.||||||||||||:|||||||.|||...:|||||:|
BPUM_3176___y 500 HPHFWASKLHFHITGVPFYNFPYTFGYMFSLGIYAKALEAGTSFEEKYIA 549
BSNT_04889 551 LLRDTASMTVEDLAMKHLGADITKRDFWENAIKLAVRDAETFLQMTES 598
||:|||||||||||.||||.|:|::||||.||.|||.|||.||:.|:.
BPUM_3176___y 550 LLKDTASMTVEDLAFKHLGVDLTQKDFWEEAISLAVADAEEFLEATKK 597
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