Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05362 and BPUM_3166
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence pep-align/BSNT_05362___yvjB.1.24716.seq
# -bsequence pep-align/BPUM_3166.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05362___yvjB-BPUM_3166.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05362___yvjB-BPUM_3166.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05362___yvjB
# 2: BPUM_3166
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 346/483 (71.6%)
# Similarity: 408/483 (84.5%)
# Gaps: 4/483 ( 0.8%)
# Score: 1762.0
#
#
#=======================================
BSNT_05362___ 1 MNQKIMAVIAAGSMLFGGAGVYAGINLLEMDKPQTA-AVPATAQ-ADSER 48
|.::|.:::.:..:|. .|||.........:.||.| ||...|| :|..:
BPUM_3166 1 MKKQIASIMVSVVLLI-SAGVMTHKEGTHAESPQAAVAVAGQAQSSDKAK 49
BSNT_05362___ 49 DKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQ 98
:..|:||||||:||||||||:|||:|||||||||||||||||||||||||
BPUM_3166 50 ENGMEKIEKAYDLISNEYVEEVDRQKLLEGAIQGMLSTLNDPYSVYMDKQ 99
BSNT_05362___ 99 TAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEII 148
||||||||||||||||||||||::|||||||.||||||.||||||.||||
BPUM_3166 100 TAKQFSDSLDSSFEGIGAEVGMDEGKIIIVSAFKKSPAAKAGLKPKDEII 149
BSNT_05362___ 149 SINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIP 198
||:||||..|.||.||||||||||:||::||:|.|.:|:|:|:|||.|||
BPUM_3166 150 SIDGESMKEKSLNDAVLKIRGKKGTSVALKIRRNGIEKELTFQIKREEIP 199
BSNT_05362___ 199 LETVFASEKKVQGHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVID 248
||||.:|.|:|.||..||||||:|||.||:||..:|::||||.|||||:|
BPUM_3166 200 LETVTSSVKEVNGHKTGYIAISSFSEDTAKDFTSSLKQLEKKGIEGLVLD 249
BSNT_05362___ 249 VRGNPGGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAYP 298
|||||||||||||:|||||:|||||||||||||||:|||||....:|.||
BPUM_3166 250 VRGNPGGYLQSVEDILKHFITKDQPYIQIAERNGDRKRYFSKRKEQKPYP 299
BSNT_05362___ 299 VNVITDKGSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSN 348
|||:.||||||||||||||:||||.|:||||.||||||||||||||||||
BPUM_3166 300 VNVLIDKGSASASEILAGAMKEAGKYEVVGDVSFGKGTVQQAVPMGDGSN 349
BSNT_05362___ 349 IKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNN 398
|||||||||||.||||||||:.|||||.|||||:.|||||||||::||||
BPUM_3166 350 IKLTLYKWLTPKGNWIHKKGVVPTIAIHQPDYFTVGPLQLKEPLQLDMNN 399
BSNT_05362___ 399 EDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGVIDTR 448
|:|:.||.|||||||||||.||||.::.||||:|||....|:|:||||.:
BPUM_3166 400 EEVRQAQTLLKGLSFDPGRVDGYFDEETKKAVLAFQSTYNLDKSGVIDLK 449
BSNT_05362___ 449 TAETLNRQIEKKKSDEKNDLQLQTALKSLFVN- 480
||:.:|:.:::.||.||||||||||||:|::.
BPUM_3166 450 TAKMMNKMVDEVKSYEKNDLQLQTALKALYLKK 482
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