Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05360 and BPUM_3163
See
DNA alignment /
Visit
BSNT_05360 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence pep-align/BSNT_05360___minJ.1.24716.seq
# -bsequence pep-align/BPUM_3163.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05360___minJ-BPUM_3163.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05360___minJ-BPUM_3163.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05360___minJ
# 2: BPUM_3163
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 238/397 (59.9%)
# Similarity: 299/397 (75.3%)
# Gaps: 2/397 ( 0.5%)
# Score: 1201.5
#
#
#=======================================
BSNT_05360___ 1 MSVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIAD 50
||.:|....||:.|||.:||||:|.|:|:|..||:|:|||||.|.|||.|
BPUM_3163 1 MSSEWMGAGLKAVGLFLIHPLFYFMILISLLHGYIRVKRERKAFQTRIED 50
BSNT_05360___ 51 IYDDLKFTYTKGLIPGLLLSVILGGLGISIPLGLLAIIAVITAAAAFTLR 100
:||:|||||:||.|.|:.||:|..||||::|.|.:.:||.:|...:...:
BPUM_3163 51 VYDELKFTYSKGWILGICLSIISVGLGIALPPGFIVMIAAMTIVFSLFFK 100
BSNT_05360___ 101 ANWMSAAYIVSVSMLIGFGLQIYQAEPFLERFPQGFAVVWPAVAVFLGLL 150
|:.:|:||.:..|.:...||..:|... ...||...:...||.:.||||
BPUM_3163 101 ASALSSAYTLGFSFIAALGLLYFQVSH--SWLPQLSMMNASAVVILLGLL 148
BSNT_05360___ 151 IITEGAVAYRSAHVRTSPALVVSSRGLPIGQQLANRVWLLPLFLLVPGNG 200
::|||.:|||:||:|||||:|:|:|||.||||.|||:|||||.||:|...
BPUM_3163 149 LMTEGILAYRTAHLRTSPAMVMSARGLLIGQQRANRLWLLPLVLLMPAGE 198
BSNT_05360___ 201 LESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPETSIRITAKRVC 250
..|.|.||||..|...||.|:.|||.:|||||:|||||..||:|||:|:.
BPUM_3163 199 FTSSLPWWPVLQVHDQSFSFILIPYILGFGQRIQGSLPIVSIQITARRIL 248
BSNT_05360___ 251 ILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFS 300
:|||.||:|||||:.:.|:|..||..|:.||.|||.||||||||||||||
BPUM_3163 249 MLGLVVALLGAASIWFEPIAWGAVFIAIAGRAFLSWKQRVNDNAAPFYFS 298
BSNT_05360___ 301 KRDQGLMVLGIIPNTPAEDLELKIGEIITKVNGIPVKNVSDFYEALQHNR 350
||:||||||||||||||.||:|:|||:|||||||.||.||:||||||.||
BPUM_3163 299 KRNQGLMVLGIIPNTPAADLKLEIGEVITKVNGIEVKTVSEFYEALQTNR 348
BSNT_05360___ 351 AYVKLEIIGLNGEIRFDQRASYEGEHHELGILFVKDDREDEAAASGS 397
|..|||||||||:.||::|||||||||:|||||||||.:.|:.|..|
BPUM_3163 349 ALTKLEIIGLNGQTRFEKRASYEGEHHQLGILFVKDDPQQESTAISS 395
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.