Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05355 and BPUM_3151

See DNA alignment / Visit BSNT_05355 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence pep-align/BSNT_05355___yvkC.1.24716.seq
#    -bsequence pep-align/BPUM_3151___ppsA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05355___yvkC-BPUM_3151___ppsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05355___yvkC-BPUM_3151___ppsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05355___yvkC
# 2: BPUM_3151___ppsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 845
# Identity:     435/845 (51.5%)
# Similarity:   596/845 (70.5%)
# Gaps:          16/845 ( 1.9%)
# Score: 2233.0
# 
#
#=======================================

BSNT_05355___      1 MYSVLFRQAEESSQLAGAKGMNLIKLTKHGLPVPDGFIIQTNALARFMED     50
                     ||||||..||||:.||||||:|||||..|||||||||||:||:.:.|:..
BPUM_3151___p      1 MYSVLFHAAEESASLAGAKGLNLIKLNNHGLPVPDGFIIKTNSFSSFLSY     50

BSNT_05355___     51 NQLQETSENVESGIISGTFSDELKDELTSSFYKLRESYRSVAVRSSSASE    100
                     :.|..|.:|:...|...:|..:::.||.|||..||::|.||||||||.:|
BPUM_3151___p     51 HNLHPTEQNLADKIKEASFPSQMEAELLSSFQSLRKTYPSVAVRSSSVAE    100

BSNT_05355___    101 DLEGASFAGQYETYLNIKTEEEFLAKVKECWASFFSGRVSSYKKKMN-NQ    149
                     |||||||||||||||||||:||||..|||||:|:|..||:.||::|: |:
BPUM_3151___p    101 DLEGASFAGQYETYLNIKTDEEFLQAVKECWSSYFGVRVTEYKEEMDENE    150

BSNT_05355___    150 IAEPLMGIVVQGLIDSEMSGVIFSRNPVTHDDRELLISASYGLGEAVVSG    199
                     ...|||.:||||||.|::||||||.||:|....|::::||||||||:|||
BPUM_3151___p    151 EEMPLMAVVVQGLIHSDVSGVIFSENPITGKTNEMMLTASYGLGEAIVSG    200

BSNT_05355___    200 SVTPDTFIVNKSSFEIQKEIGAKEIYMESAAEGIAEKETSEDMRSRFCLT    249
                     .||||||:::|.:..|:|.:|.||:.:....||:.|:..:|:|..:|||.
BPUM_3151___p    201 LVTPDTFVIDKETLSIEKSLGTKELQILPYQEGVIEQAVTEEMAGQFCLN    250

BSNT_05355___    250 DEQVIELAEITKKTEDLYGYPVDIEFGIADHQIYLLQARPITTIDQDKKA    299
                     |:|::|:..|||:.|.|||:.||||||||:...|||||||||.  ...||
BPUM_3151___p    251 DDQLVEITHITKQVEALYGHSVDIEFGIANGTFYLLQARPITA--ALSKA    298

BSNT_05355___    300 AEEK--RSFMITDTDMNDFWLNMESNIEGPVSPLFSSFIVPALEYGLKKS    347
                     |:|.  .||.:...::.|||::|:.::.||.||||||.|:|||:.|:||:
BPUM_3151___p    299 ADETVGASFQMQPDELQDFWISMDDHMPGPTSPLFSSLIIPALKSGMKKN    348

BSNT_05355___    348 MQKFPI-GVVVDEVKLYRGHIYS-----KNQGGQQPPSEDCGKELFPILS    391
                     .:|:.: .:.:.::||||||:||     :......|..::...||||.||
BPUM_3151___p    349 GEKYQVPDLNIKDIKLYRGHLYSSPSLPEASAEAVPVFDESLFELFPHLS    398

BSNT_05355___    392 EHMYDIINHTYLPFYRTLDQLAQTEHTAESALDAFQKLKAFYLTAYEEHF    441
                     |.||:|:...:.|||..||...:...|.|.|:..|::|||||:.||::||
BPUM_3151___p    399 ERMYEILEKNFFPFYEKLDLKIKEPMTIEEAIIGFEELKAFYIQAYDDHF    448

BSNT_05355___    442 NIVFPQILLTNKLQAMYQDIQG-ESENAHFYEMLTGKMNKSLETDRCLWL    490
                     :||.||::|:..::.|.....| :|:....:||:.|.||||||||:.|..
BPUM_3151___p    449 DIVIPQVILSAMIEDMLVTYTGDQSQVILLHEMMIGVMNKSLETDKKLSD    498

BSNT_05355___    491 FSMEVQENPNLLTIFENN-KPEQLQEKLEQTDEGRHFLKNVHEFLQEYGW    539
                     |:..|.::..|...|.|| |..:|.:.|.|:::||||:..:.||||.|||
BPUM_3151___p    499 FAKSVLQDKELYQAFINNEKNSELLDALTQSEKGRHFISTLEEFLQVYGW    548

BSNT_05355___    540 RSVKSHDLIEQIWVENPYFALANIQNYVRNGYHFDNEFQKTKEKREKLYN    589
                     ||||||||.|:.|||||.|.|..|::.:::...||.||.:...||::.|.
BPUM_3151___p    549 RSVKSHDLTEETWVENPEFILDIIRSNIQHQSDFDEEFAQAVIKRQETYE    598

BSNT_05355___    590 EFLENIEDPGLRTEFDRYYQWTLNSANIKDDHHFYIDAMLDAKARIFLLK    639
                     .|:..::|...:|:|:..||:.|.:|||:||||||||||||||||::|||
BPUM_3151___p    599 HFMSQVKDEAFKTKFETLYQFALQAANIRDDHHFYIDAMLDAKARVYLLK    648

BSNT_05355___    640 IGELLAENGVIQDREDLWFLYDDEVEQALLHPVSLQEKAEKRRQIFHEYE    689
                     |||||.:.|.:..:||||:|||:||..||....|......:|:....|.|
BPUM_3151___p    649 IGELLVQKGTLPHQEDLWYLYDEEVHTALTTSTSFDTVIAQRKIDMKENE    698

BSNT_05355___    690 LAQAPAYLGTPTKEQLKAAEEIVGAVIEDEKNTENHIFGIAASSGIATGP    739
                     ..|.|||:||||:.:|:..|..:|::.|:|.||.:.|:||.|||||.:|.
BPUM_3151___p    699 AIQPPAYMGTPTEAELQQVERTLGSLRENENNTSDMIYGIGASSGIVSGR    748

BSNT_05355___    740 VKIIRDANEFSQFAPGDVLVCKMTTPLWTSLFQDAKAIITDTGGILSHAA    789
                     ||:|..|.|||||...|:||||.|||||||||:||||::||.||||||:|
BPUM_3151___p    749 VKVITCAEEFSQFQKDDILVCKTTTPLWTSLFRDAKAVVTDAGGILSHSA    798

BSNT_05355___    790 IIAREYGIPAVLGTRTATERLRDGDIITVDGSSGKITVVSRS---    831
                     ||||||.:|||||||.|||.|:.||::|||||:|:|.::.:.   
BPUM_3151___p    799 IIAREYMMPAVLGTRIATETLQSGDLVTVDGSNGRIQILKQHARV    843


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05355 and BPUM_3151

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
