Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05348 and BPUM_3147

See DNA alignment / Visit BSNT_05348 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence pep-align/BSNT_05348___uvrA.1.24716.seq
#    -bsequence pep-align/BPUM_3147___uvrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05348___uvrA-BPUM_3147___uvrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05348___uvrA-BPUM_3147___uvrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05348___uvrA
# 2: BPUM_3147___uvrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 958
# Identity:     832/958 (86.8%)
# Similarity:   904/958 (94.4%)
# Gaps:           1/958 ( 0.1%)
# Score: 4390.0
# 
#
#=======================================

BSNT_05348___      1 MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAE     50
                     |||:|||||||||||||||||.||||||||:|||||||||||||||||||
BPUM_3147___u      1 MAMERIEVKGARAHNLKNIDVNIPRDQLVVITGLSGSGKSSLAFDTIYAE     50

BSNT_05348___     51 GQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_3147___u     51 GQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTV    100

BSNT_05348___    101 GTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKL    150
                     ||||||||||||||||||||.||.|||||||||||||.||||||||||||
BPUM_3147___u    101 GTVTEIYDYLRLLYARVGKPICPIHGIEITSQTIEQMTDRILEYPERTKL    150

BSNT_05348___    151 QVLAPIVSGRKGAHVKVLEQIRKQGYVRVRIDGEMAELSDDIELEKNKKH    200
                     |||||:||||||.|||||:|||||||||||:||||.:||::|||||||||
BPUM_3147___u    151 QVLAPVVSGRKGTHVKVLDQIRKQGYVRVRVDGEMEDLSEEIELEKNKKH    200

BSNT_05348___    201 SIEVVIDRIVVKEGVAARLSDSLETALRLSEGRVMIDVIGEEELMFSEHH    250
                     |||||||||||||||||||||||||||||.||||||||||:|||:|||||
BPUM_3147___u    201 SIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIGQEELLFSEHH    250

BSNT_05348___    251 ACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLS    300
                     |||||||||||||||:|||||||||||:|||||.|||||.:||:||:||:
BPUM_3147___u    251 ACPHCGFSIGELEPRMFSFNSPFGACPSCDGLGSKLEVDPELVVPNKDLT    300

BSNT_05348___    301 LKENAVAPWTPISSQYYPQLLEAACTHYGIDMDVPVKDLPKHQLDKVLYG    350
                     |:::|:|||.|.|||||||||||.|||||||||:||||:|.|..||:|||
BPUM_3147___u    301 LRQHAIAPWEPQSSQYYPQLLEAVCTHYGIDMDIPVKDIPSHLFDKILYG    350

BSNT_05348___    351 SGDDLIYFRYENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQY    400
                     ||.:.|||:|||||||:||.||:|||||||||||||||.||:||||||:|
BPUM_3147___u    351 SGSERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEKY    400

BSNT_05348___    401 MSQKSCPTCKGYRLKKEALAVLIDGRHIGKITELSVADALAFFKNLTLSE    450
                     |:.:.||||||||||||.|||||:|:|||:||:|||::||..:..:.|||
BPUM_3147___u    401 MANQPCPTCKGYRLKKETLAVLINGKHIGEITDLSVSNALDLYGQIELSE    450

BSNT_05348___    451 KDMQIANLILREIVERLSFLDKVGLDYLTLSRAAGTLSGGEAQRIRLATQ    500
                     ||:|||.||||||.||||||:.||||||||||:|||||||||||||||||
BPUM_3147___u    451 KDLQIAQLILREIKERLSFLNNVGLDYLTLSRSAGTLSGGEAQRIRLATQ    500

BSNT_05348___    501 IGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDT    550
                     |||||:||||||||||||||||||||||..||||||:|||||||||||||
BPUM_3147___u    501 IGSRLTGVLYILDEPSIGLHQRDNDRLIGTLKNMRDIGNTLIVVEHDEDT    550

BSNT_05348___    551 MMAADYLIDIGPGAGIHGGQVISAGTPEEVMEDPNSLTGSYLSGEKFIPL    600
                     |:|||||||||||||:|||:|||||||||||:|..||||.||||||||||
BPUM_3147___u    551 MLAADYLIDIGPGAGVHGGEVISAGTPEEVMKDKKSLTGQYLSGEKFIPL    600

BSNT_05348___    601 PPERRKPDGRYIEIKGASENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVN    650
                     |.|||||||||||||||.|||||.||||||||.|||||||||||||||||
BPUM_3147___u    601 PIERRKPDGRYIEIKGAKENNLKNVNAKFPLGVFTAVTGVSGSGKSTLVN    650

BSNT_05348___    651 EILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPA    700
                     |||.|:||||||:||||||.||||||:|||||||||||:|||||||||||
BPUM_3147___u    651 EILLKSLAQKLHRAKAKPGQHKEIKGMDHLDKVIDIDQSPIGRTPRSNPA    700

BSNT_05348___    701 TYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIE    750
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
BPUM_3147___u    701 TYTGVFDDVRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIE    750

BSNT_05348___    751 MHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALPFFEN    800
                     |||||||||||||||||||||||||||||||:|:|||:|||||||.||||
BPUM_3147___u    751 MHFLPDVYVPCEVCHGKRYNRETLEVTYKGKNIADVLEMTVEDALQFFEN    800

BSNT_05348___    801 IPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRT    850
                     ||||||||||::|||||||||||||||||||||||||||||||:||.||:
BPUM_3147___u    801 IPKIKRKLQTIFDVGLGYITLGQPATTLSGGEAQRVKLASELHRRSNGRS    850

BSNT_05348___    851 LYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV    900
                     ||||||||||||||||||||.||||||:||||||||||||||||.|||:|
BPUM_3147___u    851 LYILDEPTTGLHVDDIARLLKVLQRLVENGDTVLVIEHNLDIIKAADYLV    900

BSNT_05348___    901 DLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVIERDKARMKSLLK    950
                     |||||||||||||:||||||:|.:.:.|||||||||::|||:.|:|.|:|
BPUM_3147___u    901 DLGPEGGAGGGTIIASGTPEQIAKEKASYTGRYLKPILERDRKRIKQLVK    950

BSNT_05348___    951 AKETATS-    957
                     ..|:.|| 
BPUM_3147___u    951 ETESVTSS    958


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