Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05343 and BPUM_3145

See DNA alignment / Visit BSNT_05343 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_05343___yvlA.1.24716.seq
#    -bsequence pep-align/BPUM_3145.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05343___yvlA-BPUM_3145.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05343___yvlA-BPUM_3145.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05343___yvlA
# 2: BPUM_3145
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      57/114 (50.0%)
# Similarity:    79/114 (69.3%)
# Gaps:           9/114 ( 7.9%)
# Score: 278.0
# 
#
#=======================================

BSNT_05343___      1 MNRNQAIIASLCYFSVFIAPIIVPIVAYFVVNEKETKRHAIRSLISHIVP     50
                     |||:|:||||:||||||..|.||||||||||::||.||||:|:|.||::|
BPUM_3145          1 MNRDQSIIASICYFSVFFMPFIVPIVAYFVVDQKEPKRHALRALWSHVLP     50

BSNT_05343___     51 FVGWLFLFIALLGGAVAID-GDSLLPVFVIIGGAVIYFLVVIGI---IIW     96
                     ....:.|....:...::.. .|||:||..::   ::.|||.||.   :||
BPUM_3145         51 VAACVLLVFGSIPFLLSTQASDSLMPVITML---ILSFLVAIGFLISVIW     97

BSNT_05343___     97 NVIQGIKVLRAA--    108
                     |:|||||||::.  
BPUM_3145         98 NIIQGIKVLQSIKS    111


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