Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05342 and BPUM_3144

See DNA alignment / Visit BSNT_05342 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_05342___yvlB.1.24716.seq
#    -bsequence pep-align/BPUM_3144.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05342___yvlB-BPUM_3144.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05342___yvlB-BPUM_3144.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05342___yvlB
# 2: BPUM_3144
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity:     228/367 (62.1%)
# Similarity:   287/367 (78.2%)
# Gaps:           6/367 ( 1.6%)
# Score: 1184.5
# 
#
#=======================================

BSNT_05342___      1 MMQEKERILKLVEEGKLTAQEALTLIEKLDSDYKEKEEKITALSVHVHDE     50
                      |.||||||||||:|.|:|:||:||:|||:.......||.||  .|...|
BPUM_3144          1 -MNEKERILKLVEDGTLSAKEAITLLEKLEESPSVSLEKSTA--DHTFHE     47

BSNT_05342___     51 EEPFTTAKKESGKPSLGAKLFDWIDSAVKKVKEVDLDLNFGHAYDVQHIF    100
                     |:. .|..|.:|..:||||||.|:||||||||:||||||||.:.||:|||
BPUM_3144         48 EKA-GTESKGNGTENLGAKLFGWLDSAVKKVKDVDLDLNFGQSVDVEHIF     96

BSNT_05342___    101 QFKDTDFSSVELQIANGSVNIVPWEDDDIRAECQAKVYRADSQDAARHAF    150
                     ||||...|.:::|:||||:|::||:|.||||||.||:|||:..:.||..|
BPUM_3144         97 QFKDASLSHLDIQLANGSLNVMPWDDSDIRAECHAKIYRAEDGEQARQQF    146

BSNT_05342___    151 LQHIECEIKGNKFFIRTEKKTMKTNVTLYIPQKEYDKIRVKLFNGPVRGE    200
                     |..::|.::|:||||||||||||.|||||:|:.:||||:|||||||:|||
BPUM_3144        147 LNQLDCGLEGDKFFIRTEKKTMKVNVTLYVPRIQYDKIKVKLFNGPIRGE    196

BSNT_05342___    201 HLHVKEFSAKTTNGVLSFSHLTAEKAIAETANGQIKLASHSCGTIEAETI    250
                     .|..||.:|||||||:||:.|.|||...||||||||||.|.||.||.|||
BPUM_3144        197 KLKTKELAAKTTNGVVSFASLQAEKVGIETANGQIKLADHECGMIEVETI    246

BSNT_05342___    251 NGLIDLRGKSESIDVQSFNGNIAINVTESDCRSIYAKTTTGSVELAIPDD    300
                     ||||||||||||||.||||||||:.:::..|||||||||||||::.||..
BPUM_3144        247 NGLIDLRGKSESIDAQSFNGNIAVQLSDEKCRSIYAKTTTGSVDVQIPRA    296

BSNT_05342___    301 LAVKAELKSNLGSLSHELMDVEMLKEKNDTIQKEMMFTSNQAHDQNITVF    350
                     .||.|||||||||:||:|:|.||:||||:|:|||.|..:||....:|::|
BPUM_3144        297 CAVTAELKSNLGSISHDLLDAEMIKEKNETLQKEKMIKANQQAVNSISIF    346

BSNT_05342___    351 SESLTGAIKLKYSQR--    365
                     :|:.||:|::|:...  
BPUM_3144        347 AETKTGSIQVKHQSDKE    363


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